PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc027979.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 225aa MW: 25682.2 Da PI: 9.5088 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 44.9 | 3.8e-14 | 31 | 124 | 19 | 90 |
FAR1 19 skkskrngeitkrtfvCskegkreeekkk.......................tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC a+l++kk + +evtk+e Cse_sc027979.1_g050.1 31 QYKAKGFSDATLKYFYCSRQGLNEDSNGKsvtdndisgqseisddshrfgdvKKKQTRKRTSFRCGCSASLTIKKI-GNIYEVTKFED 117 56666677788999**********999999********************99899999999***************.9********** PP FAR1 84 eHnHela 90 HnH+l+ Cse_sc027979.1_g050.1 118 GHNHPLV 124 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MLKLFELEIM LVFMFVEKME LELEEVAXGG QYKAKGFSDA TLKYFYCSRQ GLNEDSNGKS 60 VTDNDISGQS EISDDSHRFG DVKKKQTRKR TSFRCGCSAS LTIKKIGNIY EVTKFEDGHN 120 HPLVAEKDMI FLKNSRKMGY TKQHFLYQVS NANFGPAVGF RLMKQVYGGF DRVGTTVIDC 180 KNQKKKISVF IGDRDAQMAV EKLLSRKLHS PGFYVNYYKG DAYIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-10 | FAR1 family protein |