PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027888.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 287aa    MW: 32567.4 Da    PI: 4.9586
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027888.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.33e-12170212246
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            g+WT +E +ll++a +++ g+ W+ Ia+++  ++t  qc++++ k
  Cse_sc027888.1_g010.1 170 GKWTDQETLLLLEALELFSGN-WNEIAEHVA-TKTKAQCILHFVK 212
                            89*****************98.*********.**********977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSTKRHGARI ARRKMSQVGE LDARKEVMEF LEYWGLINYH PLPEADVTNS LVDAQETQKV  60
NSLIQKLYEF EVEQLTTPPA PRSSFVTPEV PSRLPESVIT DESVQPDGPS VKYHCNSCAA  120
DCSRKRYHCQ KHADYDLCTQ CFNDGKLDSD MSPFDFILME PADATGASSG KWTDQETLLL  180
LEALELFSGN WNEIAEHVAT KTKAQCILHF VKMPIEDTFR DCDDEVDESQ KEKAEKKDTS  240
PDADSKKKEV GAKTSESYRT SSLSHVKESA IMRENDMRHR CRYVNDG