PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027805.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 295aa    MW: 34463.8 Da    PI: 4.9622
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027805.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.56.7e-361012012100
                 DUF260   2 CaaCkvlrrkCakdCvlapyfpaeq..pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                            CaaC+++r++C++dC lapyfp +q  p +++nvhklF+ +nv+k+l+++++++r++am++++yeA++ra+dPv G++++i +l +q+
  Cse_sc027805.1_g020.1 101 CAACRYKRQRCPPDCSLAPYFPYDQnnPDQTQNVHKLFSFNNVSKILTKIDQTRRQEAMRCMIYEANVRAKDPVGGCYRIICELDRQV 188
                            **********************9875579*********************************************************** PP

                 DUF260  88 eqlkaelallkee 100
                            +++++ela ++++
  Cse_sc027805.1_g020.1 189 REARNELAIVNQR 201
                            ********99986 PP
2DUF26023.31.8e-072112456599
                 DUF260  65 AearardPvyGavgvilklqqqleqlkaelallke 99 
                            A++ra+dPv G++++i +l +q++++++ela +++
  Cse_sc027805.1_g020.1 211 ANVRAKDPVGGCYRIICELDRQVREARNELAIVNQ 245
                            99****************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MFVLKTRLED VIKQVREAAR ELVYVKELLV EFKVAYGVQN QNEIINDHDE FDFEYLDNQS  60
SLRKDPIKPN QNEIINDHDE FDFEYLDNQS SLRKDPIKPV CAACRYKRQR CPPDCSLAPY  120
FPYDQNNPDQ TQNVHKLFSF NNVSKILTKI DQTRRQEAMR CMIYEANVRA KDPVGGCYRI  180
ICELDRQVRE ARNELAIVNQ RLAFHKPAES ANVRAKDPVG GCYRIICELD RQVREARNEL  240
AIVNQCLAFH KPAESGVQNQ NEIINDEEFS MKDLDDLRAA FYLDDILDHD DQIGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.15e-29LBD family protein