PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027506.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 287aa    MW: 32723.6 Da    PI: 9.7371
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027506.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.2e-1816103196
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                            f+k+ +++d l++g   lpkkf+e+hg++      ++l+ +++ +W+v l  +k++g+++l++GW+eFv+  gLk g  +vFk++g+s
  Cse_sc027506.1_g050.1  16 FLKIILSNDPLSTG--KLPKKFTEKHGND--LLERVILKMPNNDVWKVDL--KKSKGEIWLSNGWSEFVEHYGLKFGHLLVFKYEGSS 97 
                            77888888888888..9*********988..5668***************..********************************9988 PP

                            EE..EEEE CS
                     B3  89 efelvvkv 96 
                            +f   v +
  Cse_sc027506.1_g050.1  98 TF--GVVI 103
                            87..5555 PP
2B3322.1e-102092842098
                            HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                     B3  20 kkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                             +f +++ +gkk++s  l+l++  + ++W+v       s +y+ ++ W  Fv++ng+ +gD+++F+l++++ + l v+++r
  Cse_sc027506.1_g050.1 209 TEFRRKIlKGKKTSSWLLQLKNdARQKTWDVVA-----SIKYLGSAEWMAFVEDNGITVGDILIFELMHKDAKVLGVTILR 284
                            45666668889999999999997888******9.....6778999**********************99877767777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MKSNRHLSLP ENPLNFLKII LSNDPLSTGK LPKKFTEKHG NDLLERVILK MPNNDVWKVD  60
LKKSKGEIWL SNGWSEFVEH YGLKFGHLLV FKYEGSSTFG VVIFEPSSSE IVYPKKNIKD  120
DARKSDVSCD YKLKSVKSED ETSSSWSEDQ NHGIKFNDEG ECSKKSEHYQ KLMEGKIAIE  180
KAKANFKCDK PFFMAYVQKT TLTRGVSATE FRRKILKGKK TSSWLLQLKN DARQKTWDVV  240
ASIKYLGSAE WMAFVEDNGI TVGDILIFEL MHKDAKVLGV TILRSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-22B3 family protein