PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027394.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 306aa    MW: 35135.6 Da    PI: 6.8479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027394.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.61.1e-3266172199
                            EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                            f+k ltpsdv+k++rlv+pk++ae++        +++++++  l++ede+g+ W+++++y+++s++yvltkGW+++vk+++L++gD+v
  Cse_sc027394.1_g010.1  66 FEKPLTPSDVGKLNRLVIPKQHAEKYfplangdsSSDSQKGLLLSFEDETGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVV 153
                            99*****************************999666668889********************************************* PP

                            EEEE-SSSEE..EEEEE-S CS
                     B3  81 vFkldgrsefelvvkvfrk 99 
                            +F++++ ++ +l+++++r+
  Cse_sc027394.1_g010.1 154 LFERHRYDSDRLFIGWRRR 172
                            ***87669999******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSLTHFSSNL PETLWWTTQQ QQHPYHQYPI MDSTPKTPHF TTVNNQDSPS DDQDSSPDQY  60
PKEPMFEKPL TPSDVGKLNR LVIPKQHAEK YFPLANGDSS SDSQKGLLLS FEDETGKPWR  120
FRYSYWNSSQ SYVLTKGWSR YVKEKRLDAG DVVLFERHRY DSDRLFIGWR RRPTVAPVMA  180
PVASGGAQFS GWTTRVYYDA QYNYPSHHLP LSLHSPYQPD CIHAGGINDS VENNNQQREM  240
VATGSGNTPR RVRLFGVNLE CPDESEPSTP DSSSQGTTGQ PHYQYYSNSN NMNINFSQMR  300
YHQHQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11580.16e-64B3 family protein