PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027371.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 987aa MW: 113234 Da PI: 8.3564

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027371.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158.8	1.1e-49	195	310	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e k+rwl+++ei+aiL n++ ++++ ++ + pksg+++L++rk++r+fr+DG +wkkkkdgktv+E+he+LKvg+ e +++yYah+e Cse_sc027371.1_g010.1 195 EEaKTRWLRPNEIHAILCNHKYFTIHVKPVNMPKSGTVVLFDRKMLRNFRRDGRNWKKKKDGKTVKEAHEHLKVGSDERIHVYYAHGE 282 5559********************************************************************************** PP CG-1 90 enptfqrrcywlLeeelekivlvhylev 117 ++ptf rrcywlL+++le+ivlvhy+++ Cse_sc027371.1_g010.1 283 DQPTFVRRCYWLLDKKLEHIVLVHYRDT 310 ************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 987 aa Download sequence
MLTGITEVIL RDHSVWKDNE MPAFLSQDEG RKKARTSTDS DVHSDVHASV HGRPIGRDTA 60 KKNKPIGRDT AKKNKKKSSE FSKATYMEGV AEKWKIIKSK AFGQKKELAD GYYDLKKKEL 120 EQRQLVSEME QKRSEREDKK LALEEQKLEF DRQKKYDKDL IFYCTPIDPS LPALVGSEIH 180 GFKTMQDLDV PTMFEEAKTR WLRPNEIHAI LCNHKYFTIH VKPVNMPKSG TVVLFDRKML 240 RNFRRDGRNW KKKKDGKTVK EAHEHLKVGS DERIHVYYAH GEDQPTFVRR CYWLLDKKLE 300 HIVLVHYRDT EELHGSPNVE SNSSSDPPTS WNLSEGNDGV EQLYYVEPNE TIINHEKTLH 360 EINTLEWEEL VVPDESKSSI TPQGGNLSYF DQDDQYGLNG FVDTKLQGNG ASLQINSTFV 420 HKLLTHVQYT NVQMEPKHVN TGTGILETMG NNGIKNQDSF GRWMNYTMTD SPEIVDPNLI 480 PEPFVSAGRE NVRTLSGYNH QSHSLQQIFT INEVSPSWAP STEDTKILVV GVFHEEYLHL 540 ANSNLFCVCG DVSVPVEVIQ PGVFRCYVSS HSPGIVNLFI SFDGHKPISQ LIAFEYRAPP 600 VQNLIVSSEE RSDWNDFQVV MRLAHLLFST SRSLNIFSAK VPPKALKEAK IFAYKTRNIV 660 ERWDFLITSI TGKKISFQQA KNSLLELTLQ NRLLEWLLER ILEGHKIPYR DDEGQGVIHL 720 CAILDYTWAI FPYSWSGLSI DFRDKFGWTA LHWAAHYGRR KSVASLLSAG ANPNLVTDPT 780 SENPGGCTPA DLASKSGHEG LAAFLAEKAL LAHFKAMTLA GNVSGSLQST IPADDDSVIN 840 GPETNHRFRT WKIRKDFLNK RRQAIKIQAY FRGFQVRKQY KKIVWSVGVL EKAIIRWRLR 900 RKGFRGLQVA PSNDDEEDEK KENIAEETFF QASRKQAEER VERSVVRVQA MFRSKRAQEE 960 YRKMKLEHNQ ASLEYEEHLN PAMHMER

Sequence ? help Back to Top

Protein Sequence Length: 987 aa Download sequence

MLTGITEVIL RDHSVWKDNE MPAFLSQDEG RKKARTSTDS DVHSDVHASV HGRPIGRDTA  60
KKNKPIGRDT AKKNKKKSSE FSKATYMEGV AEKWKIIKSK AFGQKKELAD GYYDLKKKEL  120
EQRQLVSEME QKRSEREDKK LALEEQKLEF DRQKKYDKDL IFYCTPIDPS LPALVGSEIH  180
GFKTMQDLDV PTMFEEAKTR WLRPNEIHAI LCNHKYFTIH VKPVNMPKSG TVVLFDRKML  240
RNFRRDGRNW KKKKDGKTVK EAHEHLKVGS DERIHVYYAH GEDQPTFVRR CYWLLDKKLE  300
HIVLVHYRDT EELHGSPNVE SNSSSDPPTS WNLSEGNDGV EQLYYVEPNE TIINHEKTLH  360
EINTLEWEEL VVPDESKSSI TPQGGNLSYF DQDDQYGLNG FVDTKLQGNG ASLQINSTFV  420
HKLLTHVQYT NVQMEPKHVN TGTGILETMG NNGIKNQDSF GRWMNYTMTD SPEIVDPNLI  480
PEPFVSAGRE NVRTLSGYNH QSHSLQQIFT INEVSPSWAP STEDTKILVV GVFHEEYLHL  540
ANSNLFCVCG DVSVPVEVIQ PGVFRCYVSS HSPGIVNLFI SFDGHKPISQ LIAFEYRAPP  600
VQNLIVSSEE RSDWNDFQVV MRLAHLLFST SRSLNIFSAK VPPKALKEAK IFAYKTRNIV  660
ERWDFLITSI TGKKISFQQA KNSLLELTLQ NRLLEWLLER ILEGHKIPYR DDEGQGVIHL  720
CAILDYTWAI FPYSWSGLSI DFRDKFGWTA LHWAAHYGRR KSVASLLSAG ANPNLVTDPT  780
SENPGGCTPA DLASKSGHEG LAAFLAEKAL LAHFKAMTLA GNVSGSLQST IPADDDSVIN  840
GPETNHRFRT WKIRKDFLNK RRQAIKIQAY FRGFQVRKQY KKIVWSVGVL EKAIIRWRLR  900
RKGFRGLQVA PSNDDEEDEK KENIAEETFF QASRKQAEER VERSVVRVQA MFRSKRAQEE  960
YRKMKLEHNQ ASLEYEEHLN PAMHMER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein