PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027066.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 564aa MW: 63425.5 Da PI: 6.8714

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027066.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.8e-09	345	382	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Cse_sc027066.1_g010.1 345 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 382 664459******************************88 PP
2	BELL	108.9	3.1e-35	207	277	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elqk+k+kLl++leeVd++Y+ y++q++ v+ssFeavag g+a++Y slA+ka+SrhFrcL+d i++qi Cse_sc027066.1_g010.1 207 FLELQKRKSKLLHMLEEVDRKYHNYRDQMKSVVSSFEAVAGNGAARVYSSLASKAMSRHFRCLRDGIVGQI 277 569******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MVEEHKIIRG NNMMVGTSTG FVDPYVNSST NPNEFFNFEH HNSVSHNSDL FWKPSSPSSS 60 SKPIMLTGTG VSDFGQLDES SLQRCVLIPC EPNERPSQGL SLSLSSSNPS TIGIQPFELV 120 RPQQQHHHQQ PVNIHEHHDM MIDGYSVRSS RYLVPTQDLL NEFCNLGKNN HSTKAKTQRT 180 NQWQDHENSN NTNASSSKII PLNSLEFLEL QKRKSKLLHM LEEVDRKYHN YRDQMKSVVS 240 SFEAVAGNGA ARVYSSLASK AMSRHFRCLR DGIVGQIKVT KKTMGEKDIS APGATRGETP 300 RLRLLDQTLR QQRAFQQMTM LDSQPWRPQR GLPERSVSIL RAWLFEHFLH PYPSDVDKHI 360 LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYVEETKDND HENTEGVSDR FNAGIDENTN 420 VPQMDQKPTV DQLVRRDSDC LSSIINHHDH NAAKILDHDM QQSFARVSGD SFGAVELDFS 480 AYNHNFGGSS SGGAGGVSLT LGLQQHAERG RGDGSGGSLY YPRDNNMEDS QTSAQYSSLL 540 EGDQGHNLPY RNLMGAQILH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MVEEHKIIRG NNMMVGTSTG FVDPYVNSST NPNEFFNFEH HNSVSHNSDL FWKPSSPSSS  60
SKPIMLTGTG VSDFGQLDES SLQRCVLIPC EPNERPSQGL SLSLSSSNPS TIGIQPFELV  120
RPQQQHHHQQ PVNIHEHHDM MIDGYSVRSS RYLVPTQDLL NEFCNLGKNN HSTKAKTQRT  180
NQWQDHENSN NTNASSSKII PLNSLEFLEL QKRKSKLLHM LEEVDRKYHN YRDQMKSVVS  240
SFEAVAGNGA ARVYSSLASK AMSRHFRCLR DGIVGQIKVT KKTMGEKDIS APGATRGETP  300
RLRLLDQTLR QQRAFQQMTM LDSQPWRPQR GLPERSVSIL RAWLFEHFLH PYPSDVDKHI  360
LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYVEETKDND HENTEGVSDR FNAGIDENTN  420
VPQMDQKPTV DQLVRRDSDC LSSIINHHDH NAAKILDHDM QQSFARVSGD SFGAVELDFS  480
AYNHNFGGSS SGGAGGVSLT LGLQQHAERG RGDGSGGSLY YPRDNNMEDS QTSAQYSSLL  540
EGDQGHNLPY RNLMGAQILH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-118	TALE family protein