PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026852.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 377aa MW: 43027.5 Da PI: 9.0827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026852.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.7	2.5e-15	51	144	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA++ GF vrks +k+ r+g ++++ +vCs+eg ++ + + ++k++r+++ + tgCka+++ + + ++++t +++ Cse_sc026852.1_g010.1 51 YMKYASKEGFVVRKSCQKRL-RSGIVKQKYLVCSREGCPKGIHIDtldlenSDKQKRSSNLHITGCKARVMFEFIPsSTEYKLTIFDS 137 99**********998887.8898*********99887778889888899999999*********9999****** PP FAR1 84 eHnHela 90 HnHel Cse_sc026852.1_g010.1 138 IHNHELE 144 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
LNALKTPESF STYSNFDTPG ETVYYIPKVH VDVLLAKGNV YNSVDECISA YMKYASKEGF 60 VVRKSCQKRL RSGIVKQKYL VCSREGCPKG IHIDTLDLEN SDKQKRSSNL HITGCKARVM 120 FEFIPSSTEY KLTIFDSIHN HELERKEYKH LANTERQLTY VEQLFIVNAA SVNIGATGAH 180 HLWASLKGSY LLVQGTTVDF KNFFRSVNCY IGDSDAHMLI AKMENRKKHV PDFSFDYLVE 240 NAELSAIFSA DEVSKYKMMF VPFTAIDNHR KCITVVAGLL KNEIANSYIW LLKAFIKTFG 300 KAPSIVVTHQ GGAMRKTIEQ EFVGSKHRLC MWHITQKLPG KICSKIYDHT DFKRKFNQIV 360 WNMYIGPDEL SINGESH

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

LNALKTPESF STYSNFDTPG ETVYYIPKVH VDVLLAKGNV YNSVDECISA YMKYASKEGF  60
VVRKSCQKRL RSGIVKQKYL VCSREGCPKG IHIDTLDLEN SDKQKRSSNL HITGCKARVM  120
FEFIPSSTEY KLTIFDSIHN HELERKEYKH LANTERQLTY VEQLFIVNAA SVNIGATGAH  180
HLWASLKGSY LLVQGTTVDF KNFFRSVNCY IGDSDAHMLI AKMENRKKHV PDFSFDYLVE  240
NAELSAIFSA DEVSKYKMMF VPFTAIDNHR KCITVVAGLL KNEIANSYIW LLKAFIKTFG  300
KAPSIVVTHQ GGAMRKTIEQ EFVGSKHRLC MWHITQKLPG KICSKIYDHT DFKRKFNQIV  360
WNMYIGPDEL SINGESH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-22	FAR1 family protein