PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026305.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

STAT

Protein Properties

Length: 680aa MW: 77036.2 Da PI: 7.7188

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026305.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	159.6	7.2e-50	207	328	1	119
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfe 88 l vvl +a+g++v+k++e+va+L yad+g++vek d+aeapLL+ dGvef+s d+p++l+ G+asf+l isqLss+cdnrLfrikf+ Cse_sc026305.1_g010.1 207 LTVVLKDAFGRSVNKEMELVATLTYADNGAHVEKLDNAEAPLLTCKDGVEFASWDKPTRLISGHASFRLWISQLSSQCDNRLFRIKFN 294 679*********************************************************************************** PP STAT 89 ipklkk.ypfleavskpirCisrs..rntrsssl 119 + k+ + ypflea+s+pirCi + n r+s+l Cse_sc026305.1_g010.1 295 VFKMGRrYPFLEAFSRPIRCILPNlvPNPRTSTL 328 877************7652245555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MNSNVFKYSS YSSLNDFKLD IINEKNDFNG IFSLCFWIYL PHSFPSTILH QHISDITSAT 60 PFLTLNANKE LVLYPIRAVP QEATVANDVA RTKNEVPFNK WVHIGCEVTT DFMRLYMNCM 120 IVGETRVTCT ADSLRKIYLI GSNEYDSIYL HGVEILPIMS SIKYFYVKDP PVQLHFDATS 180 ATDVEVDSDG VWTVLGGKAS SRRNFSLTVV LKDAFGRSVN KEMELVATLT YADNGAHVEK 240 LDNAEAPLLT CKDGVEFASW DKPTRLISGH ASFRLWISQL SSQCDNRLFR IKFNVFKMGR 300 RYPFLEAFSR PIRCILPNLV PNPRTSTLIW KRSTSAIHTF NGPSWLNGGT MEPINNVVHE 360 AKLTPLSKRI KLGQANPVVN VKPDNVLKQP DVVRHEDGRL NSRTLDGKQE THERACNLAS 420 DLGSIEATST CKNLGSNGSP VSDLSVFKYC LGTLNEKYLL LKDLVTSASE KDVMEFAVQV 480 AQFSGCHHHR NIIRISKRMI EDGTKVWNSL SQNYDHVWWD KLILVLRDQF IKISCCRNRF 540 LVHQDFEVLR RIGGFQEKVT QENFEKMWCW LYPVAFALSQ NGLSEMWDTR WIEGFVTKEE 600 AESSLHGLGG TLVGPGTFVL RFPTSRSWPH PDAGNLIITY VGSNFAIHHR LLSLDFFYSS 660 GGKSLKDMLL EELVITGQLL

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MNSNVFKYSS YSSLNDFKLD IINEKNDFNG IFSLCFWIYL PHSFPSTILH QHISDITSAT  60
PFLTLNANKE LVLYPIRAVP QEATVANDVA RTKNEVPFNK WVHIGCEVTT DFMRLYMNCM  120
IVGETRVTCT ADSLRKIYLI GSNEYDSIYL HGVEILPIMS SIKYFYVKDP PVQLHFDATS  180
ATDVEVDSDG VWTVLGGKAS SRRNFSLTVV LKDAFGRSVN KEMELVATLT YADNGAHVEK  240
LDNAEAPLLT CKDGVEFASW DKPTRLISGH ASFRLWISQL SSQCDNRLFR IKFNVFKMGR  300
RYPFLEAFSR PIRCILPNLV PNPRTSTLIW KRSTSAIHTF NGPSWLNGGT MEPINNVVHE  360
AKLTPLSKRI KLGQANPVVN VKPDNVLKQP DVVRHEDGRL NSRTLDGKQE THERACNLAS  420
DLGSIEATST CKNLGSNGSP VSDLSVFKYC LGTLNEKYLL LKDLVTSASE KDVMEFAVQV  480
AQFSGCHHHR NIIRISKRMI EDGTKVWNSL SQNYDHVWWD KLILVLRDQF IKISCCRNRF  540
LVHQDFEVLR RIGGFQEKVT QENFEKMWCW LYPVAFALSQ NGLSEMWDTR WIEGFVTKEE  600
AESSLHGLGG TLVGPGTFVL RFPTSRSWPH PDAGNLIITY VGSNFAIHHR LLSLDFFYSS  660
GGKSLKDMLL EELVITGQLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-162	STAT family protein