PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026214.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 274aa    MW: 31621.1 Da    PI: 8.5464
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026214.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.74.1e-31261501128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Ptd+el+v+yL++k+e++kl+     +e  iy+++P++L +k+ + e++wyf ++r++  ++g+r++r+tk +g+Wk+  
  Cse_sc026214.1_g010.1  26 LLPGYRFCPTDQELIVNYLQPKLESRKLPP-ARTHEKFIYDYNPEELGRKYLSAENKWYFMTPRERVFPNGDRPKRTTKeNGFWKTGN 112
                            579************************998.5689999*********977778899********************66559****999 PP

                    NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + ev++ +++  g k+ L+fy+   +k +kt W+m ey+ 
  Cse_sc026214.1_g010.1 113 AKVEVCDVTQRRLGYKRNLAFYD---EKKRKTAWLMTEYTT 150
                            999****9**************4...44468********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MYPSIGMDSQ ISANTNQSNR DYVDSLLPGY RFCPTDQELI VNYLQPKLES RKLPPARTHE  60
KFIYDYNPEE LGRKYLSAEN KWYFMTPRER VFPNGDRPKR TTKENGFWKT GNAKVEVCDV  120
TQRRLGYKRN LAFYDEKKRK TAWLMTEYTT TDPNLPVGNG TKLNNFVLCK IYKKEKKGDR  180
NMANEEEGND EQNLLNGEPS PRRRRLNPGS NLPNEPQHVW IQEANHHLVA PLQPANCYQQ  240
EANNIDTEGS LTALTGSAQP FTAQTFSANQ DXML
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137177KKRKTAWLMTEYTTTDPNLPVGNGTKLNNFVLCKIYKKEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.19e-33NAC family protein