PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026202.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 1168aa MW: 131806 Da PI: 7.3626

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026202.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.6	1.4e-13	1041	1086	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++++++lG++ W++Ia +++ gRt +++k++w+++l Cse_sc026202.1_g020.1 1041 RGHISADEEDLIIRLHRLLGNR-WSLIAGRIP-GRTYNEIKNYWNTHL 1086 567799**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1168 aa Download sequence
MPPPCLMPWA VAIRLKNHSF SKSRFGFCSH SKDQETVNQI TSILNNNNQD YNDFISRIKS 60 FQNPLNPNLI QSILAKNQSC DPKKLLHFFN WSLHEKGILP NLNSFLILAR SFVSFNRLRY 120 ASNVLDQMIE TRKPVSDVVE AVRDVGLTSL GFTQLVYAYK SKCMLDEAVF LLLSYGDKTC 180 FVNSVCFNSL MSDLLKGGKL ELFWKVCERL RECNVKRDVY TYSNVIKGYC MCGRMEDAKR 240 VFLEMEEDGC SPNLVTYNLL IGGLCQYGLV DEAIGYKKAM VEKCVVPDAY SYSVIIDELC 300 KRNRFSDAKL VLDDMNKAGL RPKSGTYSSL IFGFLREGKI EEALSSNNDM IDKNCEPRSA 360 LWSINNLMKD LLRLNKMESF WNVYEKMLAK TLEPNDFTYT NLIGGYVRVG NLDKAKKMFS 420 EMGKKGYNPS LVTYNVLING LCISGLVDEA FELKSTMAKK GLKPDLYTYT SLIDGLCKLK 480 RSHDAKLILE DMAYVGISPD NYTYTALIDG FLKQGEVDEA FKLKDEMVVK GISVNLVTFN 540 CIINGLCKLG QYKEAIKILE GMKEEGVSPD VFCYNSLILG ICKAKRMEEA RGFLIQMVEN 600 GVQPNAFTYG AIISAYNDIA EVKAANMYFE EMIGHGIVPD QVILASMIDG HCKEGNSTEA 660 LSALKNILGK SILPDVQIYN AFIQGFSKNQ MMELAMKIYS EVREKSMNLD VFAYTSLISG 720 FIKQSDLPKA FELFDEMQQE DICPNIVTYN NLINGLCKMG DVNRAREMFD EIRGKGVMVN 780 ALTYATMIDG YCKSKNLVEA FSLLDDMSIN GVQADEYVYG SLVNGCCKEG DTEKGWLLFD 840 KMVKSGFSST PIFNTLIDGI CKTGKVKEIE HTLSDRLLRF GNVELQDIKE ARKRFDKADV 900 VYSQVAIVFD IAPVIEGVVQ HVSSRRLEIG GADLTKLFVE ELSKSNRLMK LDMSEVEKLK 960 QHYACCAEDV LAYGKTLESS PEEKHTLPDG QVGSITCQSF SRDCLRMGHL CVLEMMNVLP 1020 TSVKKGPWTR EEDELLSSXK RGHISADEED LIIRLHRLLG NRWSLIAGRI PGRTYNEIKN 1080 YWNTHLSKKL TSQGIDSKTH KPLSSPPSLN PNHNLNHSFL HLIKPKQFQQ IPMKTSQTST 1140 PSTRTVVLNL MIFLVTRLMM VSLCSWIH

Sequence ? help Back to Top

Protein Sequence Length: 1168 aa Download sequence

MPPPCLMPWA VAIRLKNHSF SKSRFGFCSH SKDQETVNQI TSILNNNNQD YNDFISRIKS  60
FQNPLNPNLI QSILAKNQSC DPKKLLHFFN WSLHEKGILP NLNSFLILAR SFVSFNRLRY  120
ASNVLDQMIE TRKPVSDVVE AVRDVGLTSL GFTQLVYAYK SKCMLDEAVF LLLSYGDKTC  180
FVNSVCFNSL MSDLLKGGKL ELFWKVCERL RECNVKRDVY TYSNVIKGYC MCGRMEDAKR  240
VFLEMEEDGC SPNLVTYNLL IGGLCQYGLV DEAIGYKKAM VEKCVVPDAY SYSVIIDELC  300
KRNRFSDAKL VLDDMNKAGL RPKSGTYSSL IFGFLREGKI EEALSSNNDM IDKNCEPRSA  360
LWSINNLMKD LLRLNKMESF WNVYEKMLAK TLEPNDFTYT NLIGGYVRVG NLDKAKKMFS  420
EMGKKGYNPS LVTYNVLING LCISGLVDEA FELKSTMAKK GLKPDLYTYT SLIDGLCKLK  480
RSHDAKLILE DMAYVGISPD NYTYTALIDG FLKQGEVDEA FKLKDEMVVK GISVNLVTFN  540
CIINGLCKLG QYKEAIKILE GMKEEGVSPD VFCYNSLILG ICKAKRMEEA RGFLIQMVEN  600
GVQPNAFTYG AIISAYNDIA EVKAANMYFE EMIGHGIVPD QVILASMIDG HCKEGNSTEA  660
LSALKNILGK SILPDVQIYN AFIQGFSKNQ MMELAMKIYS EVREKSMNLD VFAYTSLISG  720
FIKQSDLPKA FELFDEMQQE DICPNIVTYN NLINGLCKMG DVNRAREMFD EIRGKGVMVN  780
ALTYATMIDG YCKSKNLVEA FSLLDDMSIN GVQADEYVYG SLVNGCCKEG DTEKGWLLFD  840
KMVKSGFSST PIFNTLIDGI CKTGKVKEIE HTLSDRLLRF GNVELQDIKE ARKRFDKADV  900
VYSQVAIVFD IAPVIEGVVQ HVSSRRLEIG GADLTKLFVE ELSKSNRLMK LDMSEVEKLK  960
QHYACCAEDV LAYGKTLESS PEEKHTLPDG QVGSITCQSF SRDCLRMGHL CVLEMMNVLP  1020
TSVKKGPWTR EEDELLSSXK RGHISADEED LIIRLHRLLG NRWSLIAGRI PGRTYNEIKN  1080
YWNTHLSKKL TSQGIDSKTH KPLSSPPSLN PNHNLNHSFL HLIKPKQFQQ IPMKTSQTST  1140
PSTRTVVLNL MIFLVTRLMM VSLCSWIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64100.2	1e-72	NAC family protein