PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026088.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 349aa MW: 40098.4 Da PI: 9.3381

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026088.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.6	2.4e-19	169	263	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeit..krtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 ++Y++YAk++GF+vr +++ sk+n+e + + fvCskeg++ k ++ ++r+ +++rt+Cka ++v+ + + +++++ Cse_sc026088.1_g010.1 169 QYYKDYAKRAGFEVRFGQQYISKKNKEKIldLKYFVCSKEGTNPAPKAGalkKKPNSRKVSSKRTDCKAVFRVRHIPGKGYWCYDFVE 256 69****************997766544224789***99888777767788889999***********999999* PP FAR1 84 eHnHela 90 HnH+l+ Cse_sc026088.1_g010.1 257 GHNHSLV 263 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MYPSSRSKDT PSNCVEALQY EGPSQFSQVF IGVKPFVHTK VTCGEFATRS PKPFGVWLSR 60 EQRTEDHPDL VKPTISLSSL AFPPRLRTWV KDKLGWNTHT PLNFDHHRSL VVQLIVQSQM 120 KNNNEYEPVP HSVGIVSEVE GCKIWVPDIP VGQKPAYGMM YHSFEQAYQY YKDYAKRAGF 180 EVRFGQQYIS KKNKEKILDL KYFVCSKEGT NPAPKAGALK KKPNSRKVSS KRTDCKAVFR 240 VRHIPGKGYW CYDFVEGHNH SLVSEEDSVF LVSSREVTYT QQVFLYQASQ VNLGPVKGFN 300 LLRQIYGEYD FIGASSKDFL PNFSFEYQTG ENNALTNLFW ADEYAKRNY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MYPSSRSKDT PSNCVEALQY EGPSQFSQVF IGVKPFVHTK VTCGEFATRS PKPFGVWLSR  60
EQRTEDHPDL VKPTISLSSL AFPPRLRTWV KDKLGWNTHT PLNFDHHRSL VVQLIVQSQM  120
KNNNEYEPVP HSVGIVSEVE GCKIWVPDIP VGQKPAYGMM YHSFEQAYQY YKDYAKRAGF  180
EVRFGQQYIS KKNKEKILDL KYFVCSKEGT NPAPKAGALK KKPNSRKVSS KRTDCKAVFR  240
VRHIPGKGYW CYDFVEGHNH SLVSEEDSVF LVSSREVTYT QQVFLYQASQ VNLGPVKGFN  300
LLRQIYGEYD FIGASSKDFL PNFSFEYQTG ENNALTNLFW ADEYAKRNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	8e-13	FAR1 family protein