PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025424.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GRF

Protein Properties

Length: 291aa MW: 33785.6 Da PI: 7.4242

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025424.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.6	1.2e-24	80	123	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+ v ++ k+CErH+hrgr+rsrk++e Cse_sc025424.1_g020.1 80 DPEPGRCRRTDGKKWRCSKPVHPDAKYCERHMHRGRNRSRKPVE 123 79***************************************986 PP
2	QLQ	57.2	5.1e-20	17	52	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT +Q+q+L++Q+l+yKy+++++P+P++Ll+ai++ Cse_sc025424.1_g020.1 17 PFTLTQWQELEHQALVYKYMISGMPIPHDLLFAITR 52 8********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MMSTSLRNND NSSSRFPFTL TQWQELEHQA LVYKYMISGM PIPHDLLFAI TRSLDPPKYV 60 VHHPAIGWNL FQMGFGKKID PEPGRCRRTD GKKWRCSKPV HPDAKYCERH MHRGRNRSRK 120 PVELVNTNLS SSSSRQQQQS NVVSSQDHCF LLESSPYSEK DYSYGMKEEV DEHPLASVCD 180 SWHLAMNNSV SSLAKTRQRS VSEYQNDYSY LQPQNNPTKQ QQKQDQGRCY DHLALKIERI 240 DEPQKVMHHF FDESPYNGND DHCKDEDSST TQLSISIPSC AHDFFLTHND K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-51	GRF family protein