PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025266.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 565aa MW: 64948.7 Da PI: 8.9714

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025266.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58	3e-18	66	160	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + k+ +++ +r r+e r +Ckak+ v ++ +k++v++ Cse_sc025266.1_g010.1 66 AYKDYAAEAGFIVRRGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdslkdncdAKSVKRIRSEFRKNCKAKIYVVRS-AEKYRVKS 150 5*************98877..99****************9***998899999**********999.9*** PP FAR1 81 leleHnHela 90 +++eHnH + Cse_sc025266.1_g010.1 151 FVEEHNHGFK 160 *****875 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MRQNCASNEF VEDENLSTDV NDEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEAYKAYKDY AAEAGFIVRR GHQTNDGGIV INKEFLCSKE GTKKVKVKEF DSLKDNCDAK 120 SVKRIRSEFR KNCKAKIYVV RSAEKYRVKS FVEEHNHGFK KRLCSLVWRE SDKHVEFVQK 180 WEALLDEFDL DTHKWLNDMF NIKELWIPTY FRDIPMSGLM KTTSRSESEN YFFGHNSNWS 240 STLVHFLFRY ESALDQQRNN QRVLDNNSRI NRPSLKTNHL VEQHAAKFYI LEAFYVVQTE 300 IVASIESCLG SMKNLGYVKD IDKEWFGEFK VEYDEGTRSV NCSCLHFERR GLLCRHAFYT 360 LRGYGINKIP KKYLLRRWKK EAVVLPLLGS SFKANGSSGS CISKIYSKVN SIINHCGYDE 420 EKLGIFFEKL SIFESGLESS TVAQSSGNKE DSISSMIDIP KPPAIAVFPP DIGSNKGGVT 480 GARYKPSNND VRFKDPKECG KNLRKCRICN ILTDHDFRNC PNNPDRKLLS AKKDIKKSKR 540 NGKKVKRKSN NANAEHGTEE FNFKE

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MRQNCASNEF VEDENLSTDV NDEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV  60
EEAYKAYKDY AAEAGFIVRR GHQTNDGGIV INKEFLCSKE GTKKVKVKEF DSLKDNCDAK  120
SVKRIRSEFR KNCKAKIYVV RSAEKYRVKS FVEEHNHGFK KRLCSLVWRE SDKHVEFVQK  180
WEALLDEFDL DTHKWLNDMF NIKELWIPTY FRDIPMSGLM KTTSRSESEN YFFGHNSNWS  240
STLVHFLFRY ESALDQQRNN QRVLDNNSRI NRPSLKTNHL VEQHAAKFYI LEAFYVVQTE  300
IVASIESCLG SMKNLGYVKD IDKEWFGEFK VEYDEGTRSV NCSCLHFERR GLLCRHAFYT  360
LRGYGINKIP KKYLLRRWKK EAVVLPLLGS SFKANGSSGS CISKIYSKVN SIINHCGYDE  420
EKLGIFFEKL SIFESGLESS TVAQSSGNKE DSISSMIDIP KPPAIAVFPP DIGSNKGGVT  480
GARYKPSNND VRFKDPKECG KNLRKCRICN ILTDHDFRNC PNNPDRKLLS AKKDIKKSKR  540
NGKKVKRKSN NANAEHGTEE FNFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-25	FAR1 family protein