PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024703.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CAMTA
Protein Properties Length: 2072aa    MW: 236463 Da    PI: 5.64
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024703.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1159.18.8e-50451612117
                   CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                            ++e + rwl++ e++ iL+n+e+ +l +e++++p+sgsl+L+n++++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYa  
  Cse_sc024703.1_g010.1  45 VQEaQFRWLRPAEVLFILQNYEETQLNHEPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDETLNCYYAYN 132
                            566699********************************************************************************** PP

                   CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                            e+np+f+rrcyw+L++++ +ivlvhy+++
  Cse_sc024703.1_g010.1 133 EDNPHFRRRCYWMLHQAMGHIVLVHYRDT 161
                            **************************997 PP
2CG-1167.71.9e-524335492117
                   CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                            ++e + rwl++ e++ iL+n+e+ +l +e++++p+sgsl+L+n++++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYahs
  Cse_sc024703.1_g010.1 433 VQEaQFRWLRPAEVLFILQNYEETQLNHEPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDEALNCYYAHS 520
                            566699********************************************************************************** PP

                   CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                            e+np+f+rrcyw+L++++e+ivlvhy+++
  Cse_sc024703.1_g010.1 521 EDNPHFRRRCYWMLDSAMEHIVLVHYRDT 549
                            **************************997 PP
3CG-1167.12.8e-527178332117
                   CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                            ++e + rwl++ e++ iL+n+e+ +l ++++++p+sgsl+L+n++++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYahs
  Cse_sc024703.1_g010.1 717 VQEaQFRWLRPAEVLFILQNYEETQLNHKPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDEALNCYYAHS 804
                            566699********************************************************************************** PP

                   CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                            e+np+f+rrcyw+L++++e+ivlvhy+++
  Cse_sc024703.1_g010.1 805 EDNPHFRRRCYWMLDSAMEHIVLVHYRDT 833
                            **************************997 PP
4CG-1167.71.9e-52109012062117
                   CG-1    2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYa 86  
                             ++e + rwl++ e++ iL+n+e+ +l +e++++p+sgsl+L+n++++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYa
  Cse_sc024703.1_g010.1 1090 VQEaQFRWLRPAEVLFILQNYEETQLNHEPPQKPPSGSLFLFNKRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDEALNCYYA 1175
                             566699******************************************************************************** PP

                   CG-1   87 hseenptfqrrcywlLeeelekivlvhylev 117 
                             hse+np+f+rrcyw+L++++e+ivlvhy+++
  Cse_sc024703.1_g010.1 1176 HSEDNPHFRRRCYWMLDSAMEHIVLVHYRDT 1206
                             ****************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 2072 aa     Download sequence    
MLTTSFAKHR DMSSRCYQHF SSYLEFMVAL IHLLRFSGYN IKELVQEAQF RWLRPAEVLF  60
ILQNYEETQL NHEPPQKPPS GSLFLFNKRV LRFFRKDGHN WRRKKDGKNV GEAHERLKVG  120
NDETLNCYYA YNEDNPHFRR RCYWMLHQAM GHIVLVHYRD TTIGKHSAGP SFLDDSPGLL  180
TNSNGASRSS LTERIDEIDS SPELQIDEAL KKIQKQLSLE QVKDNRTFYN ENEYLDDFGF  240
TYNEQNYSAF EEFQYVSDNS VSLQYPALLF HHRLYWMSII TVLDIAQDPI NTSRNGATDF  300
GRLNQYQQPL KDELTASSQQ NYIWKDVLTY DGSLENYMYP SDTNEVLLSQ QQSDPVEELR  360
KHHSGDTVTS YECKDNAPFA IKGLSNTALP LQGREATFGS AKGRKGPLAL QEVRIKPLTS  420
ISRGKGYNIK ELVQEAQFRW LRPAEVLFIL QNYEETQLNH EPPQKPPSGS LFLFNKRVLR  480
FFRKDGHNWR RKKDGKNVGE AHERLKVGND EALNCYYAHS EDNPHFRRRC YWMLDSAMEH  540
IVLVHYRDTT IGKHSAGPIT ASTLGSSNII QSSNNYATQL ASSAAASEFD ETYNSTPGPG  600
FLDDSPGLLT NSNGASRSSL TERLDEIDSS PELQIDEALK KIQKQLSLEQ VKDNRTFYNE  660
NEYLDDFGFT YDEQYYSAFE EFQYGSDNSV SLPYPGLPLF CVARNHVYSR YNIKELVQEA  720
QFRWLRPAEV LFILQNYEET QLNHKPPQKP PSGSLFLFNK RVLRFFRKDG HNWRRKKDGK  780
NVGEAHERLK VGNDEALNCY YAHSEDNPHF RRRCYWMLDS AMEHIVLVHY RDTTIGKHSA  840
GPITASTLGS SNIIQSSNNY ATQPAASEFD ETYNSTPPSF LDDSPGLLTN SNGASRSSQI  900
EEALKKIQKQ LSLEQVKDNR TFYNENEYLD DFGLTYNEQN YSAFEKFQYG SDNSVSLQYP  960
DIAQDPINTS RNGATDFGRL YQYQQPLKDE LTASSQQNYI WKDVLTYDGL LENYMYPSDT  1020
NEVLLSQQQS DPVEELRKHH SGDTGTSYEC KDNAPFAIKG LSNVNRTVQT IEIKVAKWVD  1080
WVGYNIKELV QEAQFRWLRP AEVLFILQNY EETQLNHEPP QKPPSGSLFL FNKRVLRFFR  1140
KDGHNWRRKK DGKNVGEAHE RLKVGNDEAL NCYYAHSEDN PHFRRRCYWM LDSAMEHIVL  1200
VHYRDTTIGK HSAGPITAST LGSSNIIQSS NNYATQPAAC EFDETYNSTP GPGFLDDSPG  1260
LLTNSNGASR SSLTERLDEI DSSPELQIDE ALKQIQKQLS LEQVKDNRTF YNENEYLDDF  1320
GFTYDEQYYS AFEEFQYGSD NSVSLQYPVL DIAQDPINTS RNGATDFGRL NQYQQPLGDE  1380
FKASSQQNCI WKDMLTYDGD AAYDGSLESY MYPSDTNEVL LSQQQSDLVE ELQKHHSGDT  1440
GTSYDCKSNA LFAIKGVSNV NLTLQTVEIR VAKWADRVAS ILPSQELEDS TFPSYINIPT  1500
RNMYQSDADI FSTLFDQGQI GTPLASDSSL TIAQEQKFKI REISPEWVYA TEPSKVLIVG  1560
TFTCDPQNTE WICMFGDTEV PVEIIQEGVI SCHAPPHTPG KVTICITSGN REACSEVREF  1620
EYRDKPHMHL HNTSTENEIS RSAEELRLLV KFVQTLLSDK IGQKGSEESW NQIIEALTDD  1680
SPASSRTTDW LLEELLXYTW FPGWDLCGPW HLYLNVESVS ISVTLMAGLL FIGLHVLEGN  1740
LHFYSFYGFK CFSPEKMVAE LLASGAYPGA VTDPSQKDPT GQTAASIAET HGHNGLAAYL  1800
SEAALTSHLS SLTLKESELS KCSADLEAER TVNSISNQNL VTEDHLSLKD AIAAVRNAAQ  1860
AASRIQAAFR AHSFKKRKQK EAAERERADE YGLLPSDIEE LSAVSKLTFG NARHHSAALA  1920
IQKKYRGWKS RKDYLTLRKK VVKIQAHVRG HQARKNYEAI CWAVGIVEKI ILRWHRKRVG  1980
LRGFHLDSID ESADEDIAKI FRKQRVDVAL AEAVARVLSM VNSTPARQQY RRMLQKYQQA  2040
KAEQEGRENE GGTTSQLDAA AGMETEEFFD FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-136CAMTA family protein