PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024619.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 311aa    MW: 33854.6 Da    PI: 6.3995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024619.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.2e-204091156
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                           ++y GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  Cse_sc024619.1_g020.1 40 PKYVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 91
                           79********.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAPSQTRLEA KIMADSMQPV QPQGGGIKGR RKMPNSRGHP KYVGVRQRPS GRWVAEIKDS  60
LQKVRLWLGT FDTAEDAARA YDQAARTLRG ANARTNFELP SSGNVLRSLA ENNEPFSFEE  120
ACGSEGGDEG LLGALKAKLY TRNGSSHAKT TNIPLQPMSI NNTKKRKPTL VVPPLPSSDQ  180
LASGHHPIST DHLPVDQDQQ SHHQDRDDGL QWCYEPQPPA TVPWSAEIPW LAESSTSNQV  240
SNLSSNLFDN GLMDSMWAVP SEANQATTSQ LTAITGISGW PLGQQVVQCD NGWDGGSVAV  300
NASNWDPFVY V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein