PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024548.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SRS
Protein Properties Length: 558aa    MW: 59942.9 Da    PI: 7.6586
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024548.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702209.86.8e-653424994154
                 DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkl 91 
                             t +CqdCGnqakkdC h+RCRtCCksrg+dCathvkstWvpaa+rrerq ++ +    a+ s+a++  k++r +  ++++++s+t++
  Cse_sc024548.1_g020.1 342 STLTCQDCGNQAKKDCPHRRCRTCCKSRGYDCATHVKSTWVPAARRRERQLMTPTG--AATVSSATSGLKKPRLT--SHTTTTSHTST 425
                            5679********************************************97666554..55556677888888865..8999999999* PP

                 DUF702  92 ssaeskkeletss...........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                            s+++++++ +tss           lP++v+++avf+cvrv++v+dg++e+aYq++ +igGhvfkG+LydqG+e+
  Cse_sc024548.1_g020.1 426 SNTTPPRSYDTSSshhqdasfkesLPRQVRAPAVFKCVRVTAVEDGDDEYAYQASATIGGHVFKGFLYDQGVET 499
                            ********9999999********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
MDSKSAPMKK VPARMTGKGR KQNQFLLETF EEVFSVARGE FLRLLSSGGD ELVNFGSDLG  60
ECKFFITRFI AIMVFTVQNA NKEAENQSYV EILKRSIVLQ NAFSAIFDFM ALIVERCFQL  120
NDPSASFLLP GIMIFVECLA CCQDVVGPTL MEERQAVGFT VVATSRSSRL PSDSGAFADW  180
VANPSSSSAL RSSDQDLSLG FNAGPPTASA GMWSNSSTTS TRQINYGLPE MGMLGLRDVF  240
VVADPHGHPH SIANASAANA LGRSVGVGVI PLLSTTPCLE EDMLNSRGRG NNNSNSSTNN  300
YSIQFWQQHP QAQPHNYLNK PMISDHGFLQ ASVGGSSSTS GSTLTCQDCG NQAKKDCPHR  360
RCRTCCKSRG YDCATHVKST WVPAARRRER QLMTPTGAAT VSSATSGLKK PRLTSHTTTT  420
SHTSTSNTTP PRSYDTSSSH HQDASFKESL PRQVRAPAVF KCVRVTAVED GDDEYAYQAS  480
ATIGGHVFKG FLYDQGVETR DQNSFPNFSE LHLGGNSSSG GGRNVGGSTS SPLLDPSDVY  540
ASSGGGLITG SNYGNTIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.43e-77SRS family protein