PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc024548.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | SRS | ||||||||
Protein Properties | Length: 558aa MW: 59942.9 Da PI: 7.6586 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 209.8 | 6.8e-65 | 342 | 499 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkl 91 t +CqdCGnqakkdC h+RCRtCCksrg+dCathvkstWvpaa+rrerq ++ + a+ s+a++ k++r + ++++++s+t++ Cse_sc024548.1_g020.1 342 STLTCQDCGNQAKKDCPHRRCRTCCKSRGYDCATHVKSTWVPAARRRERQLMTPTG--AATVSSATSGLKKPRLT--SHTTTTSHTST 425 5679********************************************97666554..55556677888888865..8999999999* PP DUF702 92 ssaeskkeletss...........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 s+++++++ +tss lP++v+++avf+cvrv++v+dg++e+aYq++ +igGhvfkG+LydqG+e+ Cse_sc024548.1_g020.1 426 SNTTPPRSYDTSSshhqdasfkesLPRQVRAPAVFKCVRVTAVEDGDDEYAYQASATIGGHVFKGFLYDQGVET 499 ********9999999********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 558 aa Download sequence |
MDSKSAPMKK VPARMTGKGR KQNQFLLETF EEVFSVARGE FLRLLSSGGD ELVNFGSDLG 60 ECKFFITRFI AIMVFTVQNA NKEAENQSYV EILKRSIVLQ NAFSAIFDFM ALIVERCFQL 120 NDPSASFLLP GIMIFVECLA CCQDVVGPTL MEERQAVGFT VVATSRSSRL PSDSGAFADW 180 VANPSSSSAL RSSDQDLSLG FNAGPPTASA GMWSNSSTTS TRQINYGLPE MGMLGLRDVF 240 VVADPHGHPH SIANASAANA LGRSVGVGVI PLLSTTPCLE EDMLNSRGRG NNNSNSSTNN 300 YSIQFWQQHP QAQPHNYLNK PMISDHGFLQ ASVGGSSSTS GSTLTCQDCG NQAKKDCPHR 360 RCRTCCKSRG YDCATHVKST WVPAARRRER QLMTPTGAAT VSSATSGLKK PRLTSHTTTT 420 SHTSTSNTTP PRSYDTSSSH HQDASFKESL PRQVRAPAVF KCVRVTAVED GDDEYAYQAS 480 ATIGGHVFKG FLYDQGVETR DQNSFPNFSE LHLGGNSSSG GGRNVGGSTS SPLLDPSDVY 540 ASSGGGLITG SNYGNTIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.4 | 3e-77 | SRS family protein |