PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024478.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 401aa    MW: 45980 Da    PI: 6.3215
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024478.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY261.9e-081391792259
                            EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Y+rCt++   gC+++k+v++++++p   ++tY+g H+++
  Cse_sc024478.1_g040.1 139 KNYFRCTHKdekGCRATKQVQKTNDEPAKYKTTYNGLHTCT 179
                            68******99999**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MESSYQPECL PSNRIKSIQE LTQGQQLTNK LREMLGQPEK VEPDCKSVDS VAVQILGMFD  60
NTLSILNSYT FNGYPDILTE ATRINTRSLD FQKSQNCGEN VKFVRSEKTK RGCYKRRGNS  120
STFMKITSSL IDDGYIWRKN YFRCTHKDEK GCRATKQVQK TNDEPAKYKT TYNGLHTCTK  180
SHEVVYGISD SLDCSDNSVI LDFKTNTLIE NKQVGIFYHS SKQIPKENFS SLGFSQEQYF  240
LSDNYTASDL LTQLLDVPLE PESTILSGLD HEDMIFSDVF SSSGTLGYEI DNMLESYDFV  300
KTAWTPENPG KRFIACPIYD KKRKCGVYEF FDEDLPSDYY RQLLLDLHAR ARRGSQTVEM  360
QEHIGVLTME KARLVQELTV TKSKLQLYDR IFVILSVIIG H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-26WRKY family protein