PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024248.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 576aa    MW: 65799.7 Da    PI: 4.5653
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024248.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.43.8e-111482231590
                            -EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  15 rlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                             l+++ +f++   ++++e  t+tl++ +g  +++ v    r+ks +y+ ++GWkeF ++n++ +gD  vFk++ ++++
  Cse_sc024248.1_g030.1 148 KLRFSPDFVALARIDTRE--TITLKNDDGceKEMPVHSDKRRKSTSYYVATGWKEFQQSNDISQGDKYVFKFIISEDK 223
                            466777777555666544..89999999966777777777888888*************************8754444 PP
2B337.93.1e-12312394890
                            -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                             +++ + +l++p +f+++ g++  ++ktltl  ++g ++e+ ++y kk+++  y+  k W eF + n + egD +vFk++ ++++
  Cse_sc024248.1_g030.1 312 ISYTYKYMLYMPVDFVRSAGID--TKKTLTLLGLDGYEMEMPVRYHKKGEWkgYYVNKRWPEFQRNNAILEGDKCVFKFITSDDK 394
                            44445556**********9999..4569********99999999999998899*************************9975444 PP
3B332.61.4e-104375261099
                            HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                     B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                            v+ + +l+lp +f++  +++ +e  ++++++ +g++ ++ +    + +  ry ++ GW  F ++n++ egD +vFk+++++++ ++v+
  Cse_sc024248.1_g030.1 437 VNHKFILRLPPHFVALAKIDARE--KIIIRSVDGNERQMAIHSfkQFRLTRYHFSLGWPAFRQSNNISEGDECVFKYIRSEDKMCLVR 522
                            6778899******9766777555..7888999998888888433466666799*************************9999989998 PP

                            EE-S CS
                     B3  96 vfrk 99 
                            v ++
  Cse_sc024248.1_g030.1 523 VTKR 526
                            8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
LLPADFVALA RIGTKKNIII KSLDGNETQM ALQSYELRWS TRYCFSVGWM AFKRSNNISD  60
GDECVFKYIR SEDKMCLAKI TKKITRATEL PAEVDNDDMG DEDVNEEGKG EDAKLVDEDD  120
DNDNEEDAYD YDGDPFFILT ISKANQYKLR FSPDFVALAR IDTRETITLK NDDGCEKEMP  180
VHSDKRRKST SYYVATGWKE FQQSNDISQG DKYVFKFIIS EDKICLAKIT ERKSPARSLP  240
PAAEAPFIRS EDKICLAKIT KKKTPAGPPP RAIKSPVTEV DDDAAAAADD DDDENEDVEC  300
VDDGDPFFVV TISYTYKYML YMPVDFVRSA GIDTKKTLTL LGLDGYEMEM PVRYHKKGEW  360
KGYYVNKRWP EFQRNNAILE GDKCVFKFIT SDDKLCLAKI NKKNPTSSLP PATDDDEDEN  420
EDVERVYDED PFFVATVNHK FILRLPPHFV ALAKIDAREK IIIRSVDGNE RQMAIHSFKQ  480
FRLTRYHFSL GWPAFRQSNN ISEGDECVFK YIRSEDKMCL VRVTKRNTQA RSSPPTAIDT  540
ETRVDADDVE DDDGIADEDE DEAADEQLLL LGKKHH