PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024203.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 595aa MW: 68019.1 Da PI: 9.3056

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024203.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.5	3.8e-17	138	232	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k r+g ++++ +vC++eg +++ + + +k+ rt++ t+Cka+ + +++ + k+++t+++ Cse_sc024203.1_g020.1 138 MYMRYASEAGFGIRKSTQKIL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNLRITDCKARAVFHMMPgSRKYRLTTFD 224 8************998776.9999**********9988888999877888899999***********9****** PP FAR1 83 leHnHela 90 eHnHel Cse_sc024203.1_g020.1 225 VEHNHELD 232 ****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MVQLSKVQIA KDQYQGFNSK GSIAKVNHHI LHRHHRTTTV ITVTSSTLSH RMEIFYLNEV 60 LVSVGEDSID LDVTSSICAS NVDDNASSSS GLKTPSSFIH HDFIDTPGGS VFWVPKVAAS 120 VLPVLFSVYD YVEDCISMYM RYASEAGFGI RKSTQKILRD GFVKEKYLVC NREGCPKKIR 180 LNTLAPKKGD KQVRTSNLRI TDCKARAVFH MMPGSRKYRL TTFDVEHNHE LDHVEYKHLS 240 KSERKLTYTE QLFIIKASNY NIGATRAHSS YTGLKGSSAL VHGTDTKFNN LVRGINCFIG 300 DSDAQMLINR MEDRKKFTSD FSFDYLVENA ELIGLFWADQ VAKLNYKEFG DIVSFDATYK 360 TNKRSVTVGS GLLKNETTES YVWLLQAFKK AFVHSPNIIV TDQDGAMQKA IAEVLPDSKH 420 GLCMWHIMQK LPSKIVSRIY EDTDFKNKFH KIVWNMYIGP EEFEIRWNDL MVEFGLLNPK 480 WLNKMYRIRA SWIPAFFVDS PLCGLMRTTS RSESENSFFS HFTSPTSTLV KFMVCYESAM 540 EKQRYIQERL DHPALLTPLA IEIHAARFYT PKLFVLVQKE IIAGSWLCSI KSKRK

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MVQLSKVQIA KDQYQGFNSK GSIAKVNHHI LHRHHRTTTV ITVTSSTLSH RMEIFYLNEV  60
LVSVGEDSID LDVTSSICAS NVDDNASSSS GLKTPSSFIH HDFIDTPGGS VFWVPKVAAS  120
VLPVLFSVYD YVEDCISMYM RYASEAGFGI RKSTQKILRD GFVKEKYLVC NREGCPKKIR  180
LNTLAPKKGD KQVRTSNLRI TDCKARAVFH MMPGSRKYRL TTFDVEHNHE LDHVEYKHLS  240
KSERKLTYTE QLFIIKASNY NIGATRAHSS YTGLKGSSAL VHGTDTKFNN LVRGINCFIG  300
DSDAQMLINR MEDRKKFTSD FSFDYLVENA ELIGLFWADQ VAKLNYKEFG DIVSFDATYK  360
TNKRSVTVGS GLLKNETTES YVWLLQAFKK AFVHSPNIIV TDQDGAMQKA IAEVLPDSKH  420
GLCMWHIMQK LPSKIVSRIY EDTDFKNKFH KIVWNMYIGP EEFEIRWNDL MVEFGLLNPK  480
WLNKMYRIRA SWIPAFFVDS PLCGLMRTTS RSESENSFFS HFTSPTSTLV KFMVCYESAM  540
EKQRYIQERL DHPALLTPLA IEIHAARFYT PKLFVLVQKE IIAGSWLCSI KSKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-48	FAR1 family protein