PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc024198.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 246aa MW: 28134.5 Da PI: 6.8939 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.2 | 4.5e-21 | 67 | 120 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t+eqle+Le+ F+++++++ +++ +LA++lgL+ rq+ vWFqNrRa++k Cse_sc024198.1_g010.1 67 KKKRLTSEQLEALENTFQEEKKLDPDTKMKLAHELGLQPRQIAVWFQNRRARWK 120 56679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.7 | 6.5e-38 | 67 | 158 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 kk+rl++eq+++LE++F+ee+kL+p+ K++la+eLglqprq+avWFqnrRAR+k+kqlE y++Lk+++da+++e+++L++ev +Lr+ Cse_sc024198.1_g010.1 67 KKKRLTSEQLEALENTFQEEKKLDPDTKMKLAHELGLQPRQIAVWFQNRRARWKAKQLECLYDTLKQEFDAVSREKQKLQEEVLALRT 154 9**************************************************************************************8 PP HD-ZIP_I/II 90 elke 93 lke Cse_sc024198.1_g010.1 155 ILKE 158 8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDWNGGNPRP FIPRPAAQSS FAFLYNYNND HYVYPPGVGD MKHQMMQAPL AMMEMNQNEY 60 ENNNQDKKKR LTSEQLEALE NTFQEEKKLD PDTKMKLAHE LGLQPRQIAV WFQNRRARWK 120 AKQLECLYDT LKQEFDAVSR EKQKLQEEVL ALRTILKEQV SKRQGAGSST GYTYMSGEET 180 VESTSVATIR TTGNHHHQLT LGQHQAGPAT TNAMVPIDNN YSLNYDPSPS MATPSYSNWA 240 VLPSYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 96 | KKKRLTSEQLEALENTFQEEKKLDPDTKMK |
2 | 115 | 123 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 7e-48 | HD-ZIP family protein |