PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023287.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 287aa    MW: 32409.6 Da    PI: 6.4341
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023287.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002393115123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            ++C++C + F ++  L  H++ H
  Cse_sc023287.1_g010.1  93 FSCNYCQRKFYSSQALGGHQNAH 115
                            89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEISYEEGLL SSCNPKTDAE FQRPKEIMLQ EEQERDIDQD QDQEQERERK IENCNGDDDS  60
RLNQELNLLD SINMGNSSET TPPQASDTEP RVFSCNYCQR KFYSSQALGG HQNAHKRERN  120
LAKRGQRMGF LSSPMFSAAA AFGHTYMHQQ QHHDQNYCSS LSSLPLHGYS NNNNNRSLGI  180
QVHSMIHKPN NNSMLSTSSS GFKSFYGKNG WSSRPHVDQQ PAIGKLNLSS YPSSLTTASP  240
LTHGSVARFE VVRSGMNSTT KDDGSLWWPE LKINQDESQK LDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.19e-45C2H2 family protein