PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023251.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | SBP | ||||||||
Protein Properties | Length: 167aa MW: 19317.3 Da PI: 9.8518 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 39 | 2.1e-12 | 6 | 36 | 48 | 78 |
SEEETTT--SS--S-STTTT-------S--- CS SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 fh+ls+fD++krsCrrrL+ hn+ rr++q+ Cse_sc023251.1_g020.1 6 CFHDLSDFDDRKRSCRRRLSAHNAGRRRPQS 36 5**************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
HSNLGCFHDL SDFDDRKRSC RRRLSAHNAG RRRPQSQEIQ FSSSRMSSSK KIDRRLFLDI 60 VTEDAFKWVA THPPLLKASC KIVRLVDDIA THKEKACKFF SKQVEDTWKV IDQESLRPID 120 VPFPFLIHAI NLACMSDTLY KNKDGYNHVG KEVISHIKSI FVHPIIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 7e-09 | SBP family protein |