PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023198.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NF-YB | ||||||||
Protein Properties | Length: 119aa MW: 13218.5 Da PI: 8.4861 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 130.5 | 5.8e-41 | 1 | 81 | 17 | 97 |
NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 mk++lP akisk+aket+q+c+sefisfvt+easdkcq+e+rkt+ngdd++wal+tlGf+dy +++ yl+k+re e+e+ Cse_sc023198.1_g010.1 1 MKQILPPTAKISKEAKETIQQCASEFISFVTGEASDKCQKENRKTVNGDDICWALGTLGFDDYSQAIVRYLHKHREYERER 81 9*****************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MKQILPPTAK ISKEAKETIQ QCASEFISFV TGEASDKCQK ENRKTVNGDD ICWALGTLGF 60 DDYSQAIVRY LHKHREYERE RASAAXAASS AELASNQTNS PLEFRSLMGK GNSSHTKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 4e-39 | NF-YB family protein |