PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023173.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 313aa MW: 36050.6 Da PI: 9.8914

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023173.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.4	2.3e-08	87	169	6	89
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHel 89 A+++GF ++k+++k+ g ++ +++Cs++g++++e + ++ +r++++ +t+C kl k k ++ w + l Hn ++ Cse_sc023173.1_g020.1 87 IAQSIGFLIVKARTKTD--RGYKYSIEYKCSRHGTSAREGLE-DELQRQTSTAKTNCPFKLLAKYIKgeTNGWILRVKCLRHNNDF 169 5899******98887..6667***********9999.888999999********999988677888888889999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MPQESNNTRN NTSNNTSLTV HQQKHHHITT QEPTSNKQQH QQATSSKQQT TTPQATKPAE 60 TSPQHQQATT QPLFPDDDVL TNWVQTIAQS IGFLIVKART KTDRGYKYSI EYKCSRHGTS 120 AREGLEDELQ RQTSTAKTNC PFKLLAKYIK GETNGWILRV KCLRHNNDFV DSFHGFPQAM 180 RLKDHEFVLV EQLTKHKVAP RIILSSLKES DPDNVSSIKT IYNAQNKIRD NIRGDRTPIH 240 VLLAHLRRQG YTYYPRVNDR TNELEEIFFV HPTSYALWTT FPEIMLMNST YNTTLFKLPF 300 FTIVGVTSTN KTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-07	FAR1 family protein