PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023024.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1022aa MW: 114588 Da PI: 6.6003

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023024.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	27.3	6.9e-09	499	545	3	49
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 +++++e ++k p+ +A k+Lgv+ ++ Kr R + ++RWP k+ Cse_sc023024.1_g020.1 499 DSLTMEAVEKLVGQPMDEAIKSLGVSRSTFKRFLRDNSVPRWPMSKL 545 6899***************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MNKEIILDAL NSRYDCLKEP LPYASAALHR AYDRRYLTSL RVFGTREDEE PQSPQTLGQN 60 IIDPQSLKKK ITATISALSF RDPHVLVQFW SPVTVLKRCM LTTLDQPFGI GVLNEALYKY 120 RLESEQRMFA VDGEHIEELG GSPGHVYRQK LPEWSLDIQG LPTSQNIKDS TACHNILGYI 180 SLPVVDPASG CCVGVLELIT LSKHVDYAFE VIEISKALKE QDLKTSNAFE EPSFCKLPSE 240 DWLIQMEKIN DILVVMCDTH NLPLAHTWEL SPLGSHVLHE KSIQKSCSSF NRRCIGKVCM 300 STAGLPFYVR DLSMWEFHKA CMEQHLEKSR GVVGRALLSH CASYCENVTK LSEEEYPLVR 360 NACTSGLVGC LAIFLHGVEG KNDYILEFFL PLDIKDSIDS YVLNLVQKLK LKIEDASGFE 420 IGDISSMEVI RPRSVVNNIS SMTEVDTPNG IIPHPFVTNV ATIACGEYAN VSMQKTRDKG 480 NDAGEPSNRL IRNIKRKRDS LTMEAVEKLV GQPMDEAIKS LGVSRSTFKR FLRDNSVPRW 540 PMSKLSDRSA CVTDSNQNFL VSRSTMKGFL LDHNYIPRLA MSKLSNRSLI FSVGNRSVKD 600 PNQHFLELLK RSTGVIYSNQ HFLDKLFKRS TEIIDHRGSV LELIPVWFHS SGDVSFSTTV 660 GARGRFPSKP TLHLYHVAKL IVCLRRWKKR SFVRIAMARQ DDSLVFENTT NTEQATNNGD 720 PLMARTAMAH QNDPVVFNST TYMEQATNNV DPLMARTAMA HQNDRVVFDN TTYMEQATNN 780 VDPLMNVDLD KVTDLNFVDA FRGADFIHGQ GRFLKMAGCS SDPVLDYLME PDGIEYAMAE 840 IGRGLEGAWP SPIGSGDMYS FGANPSYYDS PNLVFDDQLT GKSLSIFGRG TVVYISTSRY 900 TLKDGILLAE GSSWMNVPVA FVSLKTLNLS GVDFGNNAMV SFIIQMIGGS PHLQMLVTRR 960 RELIVDNEAL GERGVALDSL DALRKNQAMH IDLLYRLINI YGEVDEGIRK QEGYVAKMAE 1020 NN

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MNKEIILDAL NSRYDCLKEP LPYASAALHR AYDRRYLTSL RVFGTREDEE PQSPQTLGQN  60
IIDPQSLKKK ITATISALSF RDPHVLVQFW SPVTVLKRCM LTTLDQPFGI GVLNEALYKY  120
RLESEQRMFA VDGEHIEELG GSPGHVYRQK LPEWSLDIQG LPTSQNIKDS TACHNILGYI  180
SLPVVDPASG CCVGVLELIT LSKHVDYAFE VIEISKALKE QDLKTSNAFE EPSFCKLPSE  240
DWLIQMEKIN DILVVMCDTH NLPLAHTWEL SPLGSHVLHE KSIQKSCSSF NRRCIGKVCM  300
STAGLPFYVR DLSMWEFHKA CMEQHLEKSR GVVGRALLSH CASYCENVTK LSEEEYPLVR  360
NACTSGLVGC LAIFLHGVEG KNDYILEFFL PLDIKDSIDS YVLNLVQKLK LKIEDASGFE  420
IGDISSMEVI RPRSVVNNIS SMTEVDTPNG IIPHPFVTNV ATIACGEYAN VSMQKTRDKG  480
NDAGEPSNRL IRNIKRKRDS LTMEAVEKLV GQPMDEAIKS LGVSRSTFKR FLRDNSVPRW  540
PMSKLSDRSA CVTDSNQNFL VSRSTMKGFL LDHNYIPRLA MSKLSNRSLI FSVGNRSVKD  600
PNQHFLELLK RSTGVIYSNQ HFLDKLFKRS TEIIDHRGSV LELIPVWFHS SGDVSFSTTV  660
GARGRFPSKP TLHLYHVAKL IVCLRRWKKR SFVRIAMARQ DDSLVFENTT NTEQATNNGD  720
PLMARTAMAH QNDPVVFNST TYMEQATNNV DPLMARTAMA HQNDRVVFDN TTYMEQATNN  780
VDPLMNVDLD KVTDLNFVDA FRGADFIHGQ GRFLKMAGCS SDPVLDYLME PDGIEYAMAE  840
IGRGLEGAWP SPIGSGDMYS FGANPSYYDS PNLVFDDQLT GKSLSIFGRG TVVYISTSRY  900
TLKDGILLAE GSSWMNVPVA FVSLKTLNLS GVDFGNNAMV SFIIQMIGGS PHLQMLVTRR  960
RELIVDNEAL GERGVALDSL DALRKNQAMH IDLLYRLINI YGEVDEGIRK QEGYVAKMAE  1020
NN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	685	691	RRWKKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	4e-75	Nin-like family protein