PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022455.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 250aa    MW: 28351 Da    PI: 8.2324
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022455.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.32.4e-21104160259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                             Dgy+WrKYGqK + +s+fpr    Ct++   gC++ k+v++ ++d +++eitY g+H+++
  Cse_sc022455.1_g020.1 104 GDGYSWRKYGQKAILNSKFPR----CTHKhvqGCNALKQVQQLEDDSNMFEITYIGHHTCT 160
                            5*******************7....6666666***************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEINKKKLVE TLIKGRNSAK RLQTLLHQKV DDDELVSVDG LVNEISESFY HGLLVLTPTS  60
THLGLACNQV CHGKPPAPAI KERRGSYKRR KTIDSRIEVS GTIGDGYSWR KYGQKAILNS  120
KFPRCTHKHV QGCNALKQVQ QLEDDSNMFE ITYIGHHTCT PPNTSSHHRV VIDSKKFKNR  180
HYSQSNPSIS INNRSDAFIK QEDLFYNVSM ANDAQLTPAL VWNEILTDDL ESFKSDQTLS  240
DISFDDVMFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
188115KRRKTIDSRIEVSGTIGDGYSWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-30WRKY family protein