PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc022455.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 28351 Da PI: 8.2324 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 67.3 | 2.4e-21 | 104 | 160 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK + +s+fpr Ct++ gC++ k+v++ ++d +++eitY g+H+++ Cse_sc022455.1_g020.1 104 GDGYSWRKYGQKAILNSKFPR----CTHKhvqGCNALKQVQQLEDDSNMFEITYIGHHTCT 160 5*******************7....6666666***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEINKKKLVE TLIKGRNSAK RLQTLLHQKV DDDELVSVDG LVNEISESFY HGLLVLTPTS 60 THLGLACNQV CHGKPPAPAI KERRGSYKRR KTIDSRIEVS GTIGDGYSWR KYGQKAILNS 120 KFPRCTHKHV QGCNALKQVQ QLEDDSNMFE ITYIGHHTCT PPNTSSHHRV VIDSKKFKNR 180 HYSQSNPSIS INNRSDAFIK QEDLFYNVSM ANDAQLTPAL VWNEILTDDL ESFKSDQTLS 240 DISFDDVMFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 115 | KRRKTIDSRIEVSGTIGDGYSWRKYGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-30 | WRKY family protein |