PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022455.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 376aa MW: 42442.7 Da PI: 7.4974

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022455.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.6	1.4e-29	196	256	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqKe+ gs+fprsYYrCt++ +C +kk+v+r ++dp ++e+tY+geH+++ Cse_sc022455.1_g010.1 196 EDGYTWRKYGQKEILGSRFPRSYYRCTHQklyNCLAKKQVQRLDNDPYTFEVTYRGEHTCT 256 7**************************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MHTNPIICNT SFVVSLPRLK YTLIPNHTDH YHNKKIKRAQ KTSMEDIVSL IFHGCKLVKE 60 LEERLPNIAN QPHVLISSCD EISRVFGNVR EQMSLAVHNY GQHEPPPAME VGGGSLPEWL 120 RSSHAMDMVL QGQIALHQHH GLEAIAGQEL GGGNVDPVAT DVAPSLQRTR RRKHEADRRT 180 LQVPAPRMGN TDVPPEDGYT WRKYGQKEIL GSRFPRSYYR CTHQKLYNCL AKKQVQRLDN 240 DPYTFEVTYR GEHTCTMSST APSMPPPPPE AMTTHSLPSH LPHTESQSLP QWLSMEINRQ 300 SREDLYSVTR QSIQTYQNQP NISTGAGPSS PTRYGDYQGV NDLVDTMFNS GSSSNNSMEL 360 IFSSNEEKKE GEEKTK

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MHTNPIICNT SFVVSLPRLK YTLIPNHTDH YHNKKIKRAQ KTSMEDIVSL IFHGCKLVKE  60
LEERLPNIAN QPHVLISSCD EISRVFGNVR EQMSLAVHNY GQHEPPPAME VGGGSLPEWL  120
RSSHAMDMVL QGQIALHQHH GLEAIAGQEL GGGNVDPVAT DVAPSLQRTR RRKHEADRRT  180
LQVPAPRMGN TDVPPEDGYT WRKYGQKEIL GSRFPRSYYR CTHQKLYNCL AKKQVQRLDN  240
DPYTFEVTYR GEHTCTMSST APSMPPPPPE AMTTHSLPSH LPHTESQSLP QWLSMEINRQ  300
SREDLYSVTR QSIQTYQNQP NISTGAGPSS PTRYGDYQGV NDLVDTMFNS GSSSNNSMEL  360
IFSSNEEKKE GEEKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	3e-59	WRKY family protein