PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc022263.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 183aa MW: 21362.1 Da PI: 6.9337 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.2e-09 | 38 | 72 | 1 | 34 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkg 34 +g W++eEde+lv++++ +G + +W+++++ g++ Cse_sc022263.1_g010.1 38 KGLWSPEEDEKLVNYITTYGRHgCWSSVPNLAGLK 72 678*****************98********99944 PP | |||||||
2 | Myb_DNA-binding | 35.3 | 2.7e-11 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +E l+++++++l ++ W+ Ia+++ gRt+ +k++w++ Cse_sc022263.1_g010.1 73 RGSFSLQEAALIIELHNMLRNK-WAQIASYLS-GRTDSAVKNFWNS 116 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MSNNVFYIRR YGITRSCFGQ ERCMREETDS AIDKKLTKGL WSPEEDEKLV NYITTYGRHG 60 CWSSVPNLAG LKRGSFSLQE AALIIELHNM LRNKWAQIAS YLSGRTDSAV KNFWNSNTKK 120 KLLQFQLQTV NDQARRVDAP LPLVKHDQET ENEVDFPPLL PSFMREYFDP ILDQNWDPNQ 180 FDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 9e-39 | MYB family protein |