PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc022254.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 163aa MW: 18338.9 Da PI: 9.5906 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykG+r +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a l+g Cse_sc022254.1_g020.1 17 QYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVYLLRG 66 69*****99.**********9...336*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MDGGCSSTRK RKSDERQYKG IRMRKWGKWV AEIREPNKRS RIWLGSYSTA VAAARAYDTA 60 VYLLRGPSAR LNFPELLASD VGPDELSAAS IRKKAAEVGA RVDAFETSGA HDHAKTFELK 120 PKLELELELE LKSKPKLCWF EEKPDLNKKP KPEPGSEYTD GDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 13 | TRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 6e-38 | ERF family protein |