PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021999.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 339aa MW: 37820.2 Da PI: 10.2795

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021999.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.4	2.2e-31	273	330	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ ed +++++tYegeHnh+ Cse_sc021999.1_g020.1 273 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDSTMLIVTYEGEHNHP 330 9**********************9988**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEEVEAVNRA AVESCHKMLS LLSQPQDQVQ YKNLMVQTGD AVVRFKKVVS LLDKGVGHAR 60 VRMVKKNPTP IPQNLLLDKP TTIINHQSPK PLQLMLESHP VQEFGSNVVK NTLTLGHQSY 120 HQSPIQIPQN TPHPSSTNYS FLQQQQKLKQ QAEMMYRRSS NSGMSLSSGI SLNFDSSTCT 180 PTMSSNRSFM SSLSIEGSVA NMDGGSFRLI GSSRSADQAT YQHKKRCSVR GDDGSVKCGS 240 SGRCHCSKKR KHRIKRSIKV PAISNKLADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSM 300 RGCPARKHVE RCLEDSTMLI VTYEGEHNHP RVPVQSTIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04670.1	4e-70	WRKY family protein