PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021763.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 695aa    MW: 78087.9 Da    PI: 6.2134
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021763.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.9e-18127250198
                            EEEE-..-HHHHTT-EE--HHH.HTT.................---..--SEEEEEETTS-EEEEEE...............EEETTE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.................ggkkeesktltledesgrsWevkliy.............rkksgr 58 
                            f+k+lt sd++++g +++ +++a+++                 +++    ++l+  d++g++W +++i+              ++++r
  Cse_sc021763.1_g030.1 127 FCKTLTASDTSTHGGFSVLRRHADDClpplnatnydfhgqdmsQQP--PWQELIASDLHGNEWHFRHIFrgytlrllystdrYRQPRR 212
                            99************************************99964333..3458***************9999********988888888 PP

                            EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                     B3  59 yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                            ++lt+GW+ Fv+a++L +gD ++F   + +++el+v+v+r
  Cse_sc021763.1_g030.1 213 HLLTTGWSVFVSAKKLVAGDAFIFL--RGENGELRVGVRR 250
                            *************************..449999*****97 PP
2Auxin_resp111.96.3e-37276358183
             Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                            a+ha++t++ F+v+Y+Pr+s+seF+v+++k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d+ +++W +S+WrsLk
  Cse_sc021763.1_g030.1 276 ASHAINTGTLFSVFYKPRTSRSEFIVSLNKYLEAKNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDSASSKWIDSEWRSLK 358
                            789******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    
MAHSAANHYP GGPQSGSVAE ALYKELWHAC AGPLVNVPRE GERVYYFPQG HMEQLEASMH  60
QGLDQQLPSF DLPAKILCKV MNVQLRAEPE SDEVYAQITL LPDRDQNEVT SPDPPLPEPP  120
SCTVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLNATN YDFHGQDMSQ QPPWQELIAS  180
DLHGNEWHFR HIFRGYTLRL LYSTDRYRQP RRHLLTTGWS VFVSAKKLVA GDAFIFLRGE  240
NGELRVGVRR LMRLSNNMPS SVISSHSMHL GVLATASHAI NTGTLFSVFY KPRTSRSEFI  300
VSLNKYLEAK NHKLSVGMRF KMRFEGEEVP ERRFSGTIVG VGDSASSKWI DSEWRSLKVQ  360
WDEPSSILRP DKVSPWDLEP LVASNPPNPQ PPQRSKRARP HVLPSSVPDL SALGMWKSPV  420
DRPAAFQYGD PQRARDGYPS NNGPAINGVS HGYSENGSLP PASTTSIHWS NLREAVTESF  480
EPLIDKEGGG KRQTNGYRLF GIELLDPSTV EETSPMILSR AVADERPICP LDTESEWHSE  540
PSNMYRSDIP SASCDPEKSS IRSPELHARQ IRSCTKVHMQ GMAVGRAVDL TQFNCYEDLL  600
EKLENMFEIE GELRVVPKKW QVVYTDAEDD IMMVGDDPWH EFCSMVRKIF IYTTEVAKRL  660
SPKIKLPEND EIIQGMPVFN AHLSTEEQSS SNEGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein