PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021549.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 19634.1 Da PI: 8.608 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g Cse_sc021549.1_g020.1 34 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYLTPVAAARAYDTAVFYLRG 83 59*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MKSTTSISDN NPRTYSPTIT TTTNGKIPKT EHRPYKGIRM RKWGKWVAEI REPNKRSRIW 60 LGSYLTPVAA ARAYDTAVFY LRGPTARLNF PELLCSDVGL DEMSAACIRK KAIEVGSRVD 120 AETSCTLVHR GGTSDNNDLH AIGGESSELK ACWFEEKPDL NKKPEPEDPD GNNYW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 3e-52 | ERF family protein |