PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021505.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 291aa    MW: 33000.2 Da    PI: 6.8274
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021505.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.13.3e-32185243159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYGqK vk+s+fpr+YY+Cts++C+vkk+ver+ +dp++v++tYeg+H+h+
  Cse_sc021505.1_g030.1 185 LDDGYRWRKYGQKAVKNSHFPRGYYKCTSPSCNVKKRVERCMSDPSYVVTTYEGQHTHP 243
                            59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDKELMMMMM VKMENNPYQQ MDHVPLSEPF SSVLPLCASE VDQKCSSLGF MDLLGFQDYY  60
STTTPSLVFD EHDHQLPIPP LLPSSSDHHV KQDDDNNGGL DHKEDDVITT VDEETSSVVL  120
SGQQQPSSPN SSCISSPAHQ LLHKPNKQCM KAKKTMSGNE TKTTKKKKEK EARFAFMTRT  180
EIDHLDDGYR WRKYGQKAVK NSHFPRGYYK CTSPSCNVKK RVERCMSDPS YVVTTYEGQH  240
THPVNSNSTP LIPSFNHLQT APTITNSSPA MLKLDQGGLL QDMMFYHQQH H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.17e-38WRKY family protein