PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021422.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 612aa MW: 66794 Da PI: 6.6525

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021422.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.7	2.1e-32	266	323	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgs++prsYY+Ct+a+Cpvkkkvers+ +++++ei+Y+g Hnh+k Cse_sc021422.1_g020.1 266 DDGYNWRKYGQKQVKGSDYPRSYYKCTHANCPVKKKVERSH-EGHITEIIYKGAHNHPK 323 8**************************************.*************85 PP
2	WRKY	103.5	1.2e-32	445	503	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+ Cse_sc021422.1_g020.1 445 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHD 503 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MGGFDDHVGV IGDWGAPSPS PRTFFSNMLE EAGSRLESDK PKEDNVNSGF TFPGPDKQFG 60 SENGDQVAKQ GGFGEPKVGS SRSGFAERLA ARTGYSAPRL NTDIVKPSAD LAKDSSYLTI 120 PPGLSPTSFL DSPVFLSNSL AQPSPTTGKF PFAPNANGRS SMMFSDSSDR NKDKLFEDFN 180 NTSSFAFKPV PESAPISNQV NPPFMSWQTE NRFPSQNIQT SQNGASLHHH SVATEKRAEV 240 NGTVQDHHDD DADQRTSGDN GNNNSDDGYN WRKYGQKQVK GSDYPRSYYK CTHANCPVKK 300 KVERSHEGHI TEIIYKGAHN HPKPPPSRRS GLGSSSDIQG GNEWGHDGNL EVTSSTIVHQ 360 GQNGTQFESS DAVDGSTTFS NDEEEDDRAT HGSVSLGYDG EGDESESKRR FNNLVEAYAA 420 EVSGASRAIR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTSTGCTVRK 480 HVERASHDLK SVITTYEGKH NHDVPAARNS SHNNSQAQSI QPSQIQNPMA RYERPHFGQG 540 FGPHGYGYGM NLPGPGLGQM AMVGLGPNQY LGQGMMMPKG EPKVEPVSDP GLNGSSVYHH 600 QMMNRMPLGP HM

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MGGFDDHVGV IGDWGAPSPS PRTFFSNMLE EAGSRLESDK PKEDNVNSGF TFPGPDKQFG  60
SENGDQVAKQ GGFGEPKVGS SRSGFAERLA ARTGYSAPRL NTDIVKPSAD LAKDSSYLTI  120
PPGLSPTSFL DSPVFLSNSL AQPSPTTGKF PFAPNANGRS SMMFSDSSDR NKDKLFEDFN  180
NTSSFAFKPV PESAPISNQV NPPFMSWQTE NRFPSQNIQT SQNGASLHHH SVATEKRAEV  240
NGTVQDHHDD DADQRTSGDN GNNNSDDGYN WRKYGQKQVK GSDYPRSYYK CTHANCPVKK  300
KVERSHEGHI TEIIYKGAHN HPKPPPSRRS GLGSSSDIQG GNEWGHDGNL EVTSSTIVHQ  360
GQNGTQFESS DAVDGSTTFS NDEEEDDRAT HGSVSLGYDG EGDESESKRR FNNLVEAYAA  420
EVSGASRAIR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTSTGCTVRK  480
HVERASHDLK SVITTYEGKH NHDVPAARNS SHNNSQAQSI QPSQIQNPMA RYERPHFGQG  540
FGPHGYGYGM NLPGPGLGQM AMVGLGPNQY LGQGMMMPKG EPKVEPVSDP GLNGSSVYHH  600
QMMNRMPLGP HM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-143	WRKY family protein