PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021003.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 200aa MW: 22383.5 Da PI: 5.5588 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 53.6 | 4.4e-17 | 70 | 106 | 23 | 59 |
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYY+Cts gC+v+k+ver+++d + v++tYeg+Hnh+ Cse_sc021003.1_g020.1 70 SYYKCTSLGCSVRKHVERASQDMRSVITTYEGKHNHD 106 9***********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MSSQILSNHE VNDYPDQSYC SQGSGPFNSV ATPENSLISV GDDEFDRSRS RSAGDDLDAD 60 EDEPQIKRWS YYKCTSLGCS VRKHVERASQ DMRSVITTYE GKHNHDVPMA RGSGHRLATA 120 TVGNNVPTMA IKPMAISHYQ ANNSMVDPIR GSRFAPSSDN QSPFTLEMLQ SPGSFKFSRF 180 ENALKSNYID QQHDSEREFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 6e-27 | WRKY family protein |