PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020757.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 355aa MW: 40502.5 Da PI: 8.6347

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020757.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.3	1.4e-06	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+k F r nL++H rtH Cse_sc020757.1_g040.1 105 YVCDTCSKGFVREQNLQVHGRTH 127 9*********************9 PP
2	zf-C2H2	14.1	0.00014	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc020757.1_g040.1 180 HKCDTCSKAYAAEVDLKAHLKIC 202 79*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MIVEDNDGEY ILHHEYFLLK KQYIDEDHTL SFIVQISEPL PPQYFIKLVS DRWLGSLSIF 60 PVSFHHLILS EKYPPPTEFL DLQPYPVRSD IVAVSPKTLL DARRYVCDTC SKGFVREQNL 120 QVHGRTHNLS FTLRKSSSNA PKKFLCPEPT CIYHNPSRAI GDMGGLKKHY LRKHSTEKNH 180 KCDTCSKAYA AEVDLKAHLK ICCKKKHKCS CGMKFQRKCD LNLHMDRYCN ARMSNGSTGY 240 SSRTDIGNNS INVSRNNNTE SFIGSTSSYP PPFNMRHNPV QVTINQNNST LTTQSESPSV 300 QTPFNSYPTI YHYETQLHDF VAHQGSLMTN QFMGSNSGQN FPTSFIPSTQ QNQXV

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MIVEDNDGEY ILHHEYFLLK KQYIDEDHTL SFIVQISEPL PPQYFIKLVS DRWLGSLSIF  60
PVSFHHLILS EKYPPPTEFL DLQPYPVRSD IVAVSPKTLL DARRYVCDTC SKGFVREQNL  120
QVHGRTHNLS FTLRKSSSNA PKKFLCPEPT CIYHNPSRAI GDMGGLKKHY LRKHSTEKNH  180
KCDTCSKAYA AEVDLKAHLK ICCKKKHKCS CGMKFQRKCD LNLHMDRYCN ARMSNGSTGY  240
SSRTDIGNNS INVSRNNNTE SFIGSTSSYP PPFNMRHNPV QVTINQNNST LTTQSESPSV  300
QTPFNSYPTI YHYETQLHDF VAHQGSLMTN QFMGSNSGQN FPTSFIPSTQ QNQXV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	4e-40	C2H2 family protein