PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020410.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 302aa MW: 34212.1 Da PI: 6.5178

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020410.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.4	3.3e-10	136	183	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq Cse_sc020410.1_g040.1 136 SHSLAERVRREKISERMKYLQELVPGC----SKITGKAGMLDEIINYVQSLQ 183 8************************....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MMNVVSPEML MSVYERQQAI MKLQQQQSFV NEYDNNDHFS GLVQDIKPVP CMQNGWPDLS 60 NDQFPSLMVD EKIKKRKTHE DPKLKVGCKE NDVKEKKVKG CSQEESTKTS SKSNAVEAKK 120 QDFIHVRARR GQATDSHSLA ERVRREKISE RMKYLQELVP GCSKITGKAG MLDEIINYVQ 180 SLQKQVEFLS MKLASLHPTF DFDIDNLITN EMFELSAVGY SSEIAGSAYF QLNSLLEMGN 240 SPIDMMLRRS ISAPVSIPET SAVPSCYNQI QPSVIWDGDL QILDKMGFQQ TIPFQAHKFT 300 GA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	79	KKRKTH
2	75	80	KKRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-53	bHLH family protein