PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc020202.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | CAMTA | ||||||||
Protein Properties | Length: 107aa MW: 13094 Da PI: 9.8295 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 138.9 | 1.6e-43 | 7 | 106 | 2 | 103 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 l+e + rwl++ e++ iL+n+ek++ + +++++p s sl+ +++r+frkDG++w++kkdg+tv+E++e+LKvg++e+l+cyYah+ Cse_sc020202.1_g040.1 7 LQEaQFRWLRPAEVLFILQNYEKFRQSPDPPQKPASNSLFY---RVLRFFRKDGHNWRRKKDGRTVHEAYERLKVGNIEALICYYAHG 91 556599********************************984...8******************************************* PP CG-1 89 eenptfqrrcywlLe 103 eenp+fqrrcyw+Le Cse_sc020202.1_g040.1 92 EENPKFQRRCYWMLE 106 **************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence |
YNLGELLQEA QFRWLRPAEV LFILQNYEKF RQSPDPPQKP ASNSLFYRVL RFFRKDGHNW 60 RRKKDGRTVH EAYERLKVGN IEALICYYAH GEENPKFQRR CYWMLEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 6e-47 | CAMTA family protein |