PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc020202.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 256aa MW: 28905.7 Da PI: 10.1343 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.6e-16 | 47 | 89 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g+W++eEde l ++v+++G++ W+ I + ++ gR++k c+ rw+ Cse_sc020202.1_g020.1 47 KGPWSPEEDEMLQNLVEKHGPN-WSVIGKFIP-GRSAKTCRVRWF 89 79******************77.*********.***********7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 256 aa Download sequence |
MESDESGVIK MKNKTSLSKY RLRRKKGLRL AMSSVNNSQK KDMDPIKGPW SPEEDEMLQN 60 LVEKHGPNWS VIGKFIPGRS AKTCRVRWFS SPQVMPFTPE EDHTILLSHA YYGDKWVSIA 120 KKLIGRPYDV IQNHWNSTLK WKSSSMTNEA KIQPPSVSDI NCGLGNSYIH DCNLSLAVAP 180 SISDMTRDNM SSGGTHSYRS DHSAPSRDAL SKRDSSQIMS DSDNSSEVSS FEPVRPSRLN 240 RVSSKKRTKM SRFFEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G23290.1 | 2e-42 | MYB family protein |