PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc020192.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 294aa MW: 33207.5 Da PI: 7.9662 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 74.7 | 1.1e-23 | 102 | 162 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqKe+ + +fpr Y+rCt++ gC++ k+v++ ++ ++ + itY g+H++ Cse_sc020192.1_g020.1 102 EDGYQWRKYGQKEILNFKFPRCYFRCTYKedlGCMAIKHVQQLENKTNKFRITYFGRHTCA 162 7***************************99999*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MEKKINILEE ALINGKNSAK RLQNLLSRKD LNTDEIVSID DLVMDITKSF VDGLSVLSSF 60 GSTDPEPQEI EETPPPLAKQ GRGQYKIRTS MDSRVKVSDT PEDGYQWRKY GQKEILNFKF 120 PRCYFRCTYK EDLGCMAIKH VQQLENKTNK FRITYFGRHT CATTTHNRVV PHDNHGVVLD 180 FEAFKNPGYT ANIPSTTKTT NIKPSRKRKS LSNKVSSTND ARSSPSLVSK DLKAMDDLYP 240 YYATPGSVNG GSSPSIISDG LLGMDIFENE VFLREFMGDD VHDGIILESF WGRN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 205 | 210 | SRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-28 | WRKY family protein |