PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019923.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1255aa MW: 143929 Da PI: 6.4675

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019923.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	29	2.2e-09	501	540	5	44
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 s e++++++ +++k+AA eLgv+l++LKr+ ++G++RW Cse_sc019923.1_g030.1 501 FSREEIEQHYGKTMKKAAEELGVSLSTLKRKHNKLGMSRW 540 6789************************************ PP
2	RWP-RK	26.3	1.4e-08	1072	1122	4	49
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW.....PhRki 49 ++s ed+++++ +++k+AA eLgv+l++LKr+ ++G++ W P+Rk+ Cse_sc019923.1_g030.1 1072 KLSREDIEQHYGKTMKKAAEELGVSLSTLKRKHNKLGMSGWqgpdlPQRKV 1122 7999***********************************998877777877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1255 aa Download sequence
MSGSGDEEED PSGFLESFPT YRLHSKPRSV LELWVFSSKD EGYENNSYLS DDAGTRTMIY 60 DKIKSAFSKI DFYYELIAQF WAPVTIGGKL QLSTYGQPFA VSDLFSSFEK YRRRCVEYNF 120 DIDVNCNNSK FRGTPASVFL NRILETISMH TIVHHEVDPF WLNAFLECGL TTSFMMPIYC 180 PSETSSSCDC IGVIECSTWF TNCTDLFIEM NMKMKEVGLG VYNVQDRIPY KSSSFLTSLS 240 YCEKLHVYNY FTLVEQTING LKLARDQIQE TLKIVCQSHQ IALAQVWFAS LDENHVHFSF 300 SLEEAQTRRL LGLKLTGYNS FDDNFAKDKW TFRNYHDACD LIPLQPGQEL VMKTLKDHKP 360 RFCKNISQLV TYKFMGLGSP AFDGIKSLTI CMRSIHTGDC NYVFEFLWNH NSFYPILLEE 420 LLLKIKSCLP SFKYASGTEI GDNLHVTEVD NSTDKEVKKF DIFQLKRLSP IPDSMNKGKK 480 VMVVKYNALS KEKRDTTEIK FSREEIEQHY GKTMKKAAEE LGVSLSTLKR KHNKLGMSRW 540 QGPDLPQRKA YNSNKNQSKE SHTHEKDNGV IQDPSPVKRN ENTVFKAEYA DDIIKLHLRI 600 SEATFVTVEN EIGKKFKLKH GTFKIKYLDE DEEWILMTSD QDLSDCIQNP RNVDRTAVRL 660 RVNNGEELIV QFWAPITSGN RLVLLTSGQP FAVSDFGEAL VEYRGRCMGY ECNIDMNNDN 720 NKVIKDEIEQ HGDRHPMTMI SGPPTNAFLN RLPEAVVNTK NHREGSLMRY ASDCGLWTSY 780 TLPIGCPSQY YSSCIGVVEC SINIMASINL KIVNNMNRAL DQEGLNVFNV QDRIPYNTIN 840 GLKLVRDEIK VALKSVCESH KIGGAQVWIS YEDENHVPFS FSSEDTQTTR RLALKLTGYN 900 SVDEDSTAFH WRFKEYYDAC DMVPLKKGEE LVEKTLQDYR PRFSENISQL GSDTLMGWVS 960 TNDVACSGFT ICMSIDTGDF NCAFEFIWHH NPDYLLLLEA LPRFKFASGA ELGDQLHVID 1020 VDNSTESETK FFKIFKEKRL SPIPEAIDKG KKAMGVNYNA RSKEKHDTTE IKLSREDIEQ 1080 HYGKTMKKAA EELGVSLSTL KRKHNKLGMS GWQGPDLPQR KVYKSNKNQS KESHTHEKDN 1140 GLIQDPSPVK RNENSVIKAE YADDIIKLHL RISEATFVTV ENEIGKKFKM KHGTFKIKYL 1200 DEDEEWILMT SDLDLSYCIQ NSRNVDQFDC VYGVVGIVER KFLNHFERLG GYRVD

Sequence ? help Back to Top

Protein Sequence Length: 1255 aa Download sequence

MSGSGDEEED PSGFLESFPT YRLHSKPRSV LELWVFSSKD EGYENNSYLS DDAGTRTMIY  60
DKIKSAFSKI DFYYELIAQF WAPVTIGGKL QLSTYGQPFA VSDLFSSFEK YRRRCVEYNF  120
DIDVNCNNSK FRGTPASVFL NRILETISMH TIVHHEVDPF WLNAFLECGL TTSFMMPIYC  180
PSETSSSCDC IGVIECSTWF TNCTDLFIEM NMKMKEVGLG VYNVQDRIPY KSSSFLTSLS  240
YCEKLHVYNY FTLVEQTING LKLARDQIQE TLKIVCQSHQ IALAQVWFAS LDENHVHFSF  300
SLEEAQTRRL LGLKLTGYNS FDDNFAKDKW TFRNYHDACD LIPLQPGQEL VMKTLKDHKP  360
RFCKNISQLV TYKFMGLGSP AFDGIKSLTI CMRSIHTGDC NYVFEFLWNH NSFYPILLEE  420
LLLKIKSCLP SFKYASGTEI GDNLHVTEVD NSTDKEVKKF DIFQLKRLSP IPDSMNKGKK  480
VMVVKYNALS KEKRDTTEIK FSREEIEQHY GKTMKKAAEE LGVSLSTLKR KHNKLGMSRW  540
QGPDLPQRKA YNSNKNQSKE SHTHEKDNGV IQDPSPVKRN ENTVFKAEYA DDIIKLHLRI  600
SEATFVTVEN EIGKKFKLKH GTFKIKYLDE DEEWILMTSD QDLSDCIQNP RNVDRTAVRL  660
RVNNGEELIV QFWAPITSGN RLVLLTSGQP FAVSDFGEAL VEYRGRCMGY ECNIDMNNDN  720
NKVIKDEIEQ HGDRHPMTMI SGPPTNAFLN RLPEAVVNTK NHREGSLMRY ASDCGLWTSY  780
TLPIGCPSQY YSSCIGVVEC SINIMASINL KIVNNMNRAL DQEGLNVFNV QDRIPYNTIN  840
GLKLVRDEIK VALKSVCESH KIGGAQVWIS YEDENHVPFS FSSEDTQTTR RLALKLTGYN  900
SVDEDSTAFH WRFKEYYDAC DMVPLKKGEE LVEKTLQDYR PRFSENISQL GSDTLMGWVS  960
TNDVACSGFT ICMSIDTGDF NCAFEFIWHH NPDYLLLLEA LPRFKFASGA ELGDQLHVID  1020
VDNSTESETK FFKIFKEKRL SPIPEAIDKG KKAMGVNYNA RSKEKHDTTE IKLSREDIEQ  1080
HYGKTMKKAA EELGVSLSTL KRKHNKLGMS GWQGPDLPQR KVYKSNKNQS KESHTHEKDN  1140
GLIQDPSPVK RNENSVIKAE YADDIIKLHL RISEATFVTV ENEIGKKFKM KHGTFKIKYL  1200
DEDEEWILMT SDLDLSYCIQ NSRNVDQFDC VYGVVGIVER KFLNHFERLG GYRVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-22	Nin-like family protein