PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc019694.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 268aa MW: 30685.6 Da PI: 5.4784 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.9 | 1.1e-29 | 136 | 195 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +C+vkkkv+rs +d +v++tYegeHnh+ Cse_sc019694.1_g020.1 136 VKDGYEWRKYGQKVTRDNPSPRAYYKCSFApTCSVKKKVQRSVDDAGIVVVTYEGEHNHK 195 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MVAASHALDL NLNLFHITDD DTPVVDVHSS SDEEDSECSF AKEDNDHMVG DLSRISKENK 60 KLKETLTILW DNYTTLQTQV KKIMQDKEVS ESSPKKRKFD ETVQQSLWKR LNEEIPKSGI 120 QRVYVPTDPS DKSLIVKDGY EWRKYGQKVT RDNPSPRAYY KCSFAPTCSV KKKVQRSVDD 180 AGIVVVTYEG EHNHKSRKEE VTYALANECD ISTSERRFDS PKVMPICDEV LVEQMATYLI 240 KDSKFTEELA AAMYSKTLEA SNFLFKVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 9e-55 | WRKY family protein |