PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc019557.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 32875.4 Da PI: 6.0753 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.1 | 8.3e-13 | 6 | 48 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l ++++++G++ W +I++ + gR++ +c sr+++ Cse_sc019557.1_g020.1 6 GPWSPEEDEMLRNLIEKHGSN-WPLISKSIS-GRSGDSCWSRLLS 48 89*****************99.*********.*********9986 PP | |||||||
2 | Myb_DNA-binding | 40.7 | 5.5e-13 | 52 | 92 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+eEd l ++v+++G + W++I++ ++ g +++ c++rw+ Cse_sc019557.1_g020.1 52 SFTPEEDTMLQNLVEKHGHN-WSLISNSIP-GTSANTCRLRWL 92 79****************88.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MDQIEGPWSP EEDEMLRNLI EKHGSNWPLI SKSISGRSGD SCWSRLLSLY LSFTPEEDTM 60 LQNLVEKHGH NWSLISNSIP GTSANTCRLR WLFVHRPFTP EEDETNYEDI TIVSLMNSDR 120 NYFLHKVCYI NRVLGKMARD NVSQLSGGMP TFKRTLFPFS GHERPQQIYT TATSETLWSL 180 NTNRTQGNSR FHLAMETESQ NSIHQGNSSH EVGGVVSGQA PSISDMARGN MSSGGTHSYS 240 HDHSAPSWNA LYKRDSSPMM IDNDNVQELV GGEFGRNDLS VVSSTSIVQG KGW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 1e-18 | MYB family protein |