PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc019323.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 172aa MW: 19056.3 Da PI: 4.6539 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 4.9e-11 | 13 | 58 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h Er RR+++ + f L +llP++ +K + a++Le A++YIk+L+ Cse_sc019323.1_g020.1 13 HVSHERDRREKLAQQFISLSTLLPTP-----TKTDMASVLEDACNYIKELE 58 7778**********************.....9****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MGKVSNTNHD QDHVSHERDR REKLAQQFIS LSTLLPTPTK TDMASVLEDA CNYIKELESH 60 VKELEESSAG CNSKDVRESP DDEASSSHKT KHGEDIEVQM SGKSVLVQFQ CKRDSSSYVN 120 VLGEMINIGL SIISTNAVTF TSTTLFINVV AEMADDFCMT PTDLSKNLQQ VL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.2 | 7e-19 | bHLH family protein |