PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc017924.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 228aa MW: 24897.6 Da PI: 7.5824 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 108.2 | 3.9e-34 | 127 | 184 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++d+k+v++tYeg+H+h+ Cse_sc017924.1_g010.1 127 NDGFRWRKYGQKLVKGNPNPRSYYRCSSAGCPAKKHVERASNDEKMVITTYEGRHDHD 184 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
ICYLDKLPLR RHADTVSPAT QTESGVMFSK LPEKPTGHSS VLPAKSHDPE TSEPETRQLQ 60 VVPSSQNVAE GAISQSIDMR SEVNNDVSSD AKRQKRDSSN MNEGISTKIN CEPRVVVQTT 120 SAVDIINDGF RWRKYGQKLV KGNPNPRSYY RCSSAGCPAK KHVERASNDE KMVITTYEGR 180 HDHDMPAAGR TVTQNMSGTG TGTTSFDNDG SRPTESGAMD MVLHVSAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 2e-41 | WRKY family protein |