PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017663.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 306aa    MW: 33698.9 Da    PI: 7.0346
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017663.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-153685255
                           HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           r +h+  E++RR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  Cse_sc017663.1_g020.1 36 RSKHSVTEQKRRSKINERFQILRDLIPNS----DQKKDTASFLLEVIEYVQYLQ 85
                           899*************************9....899999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKSSKRGHQE DDFENNNSSK ADGGKNNNYD KIDATRSKHS VTEQKRRSKI NERFQILRDL  60
IPNSDQKKDT ASFLLEVIEY VQYLQERVQK HEGSYQGYSA EPTKLMPWRN SHWRVPNFGH  120
PPVLRNDSGS APSLPVRFDE TVSTINKPPQ IPARSDPSGD LNRNLIDSQP DLQANIPVPD  180
GTLSHSTLGG SLCHVNRQST DIPAGGDGNP QDELTVEGGT INISSVYSEG LLYSLTHALK  240
SSGVDLTQAS ISVQVDLGKR ANRGLTSGAS AAKDHENPQS SNQPVSRSQE FSNGENSDQP  300
QKRQKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-86bHLH family protein