PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc017628.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 231aa MW: 26664.1 Da PI: 5.6443 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.6 | 1.4e-20 | 67 | 119 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle+Le+ F+++ +++ +++ +LA++lgL+ rqV vWFqNrRa++k Cse_sc017628.1_g010.1 67 KKRLSSEQLEALENSFQEEIKLDPDRKMKLAHELGLQPRQVAVWFQNRRARWK 119 55699***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.4 | 9.4e-39 | 66 | 156 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 kk+rls+eq+++LE+sF+ee kL+p+rK++la+eLglqprqvavWFqnrRAR+k+kqlE+ y++Lk+++da+ +e+++L++ev +Lr+ Cse_sc017628.1_g010.1 66 KKKRLSSEQLEALENSFQEEIKLDPDRKMKLAHELGLQPRQVAVWFQNRRARWKAKQLERLYDTLKQEFDAVFREKQKLQDEVLALRT 153 9*************************************************************************************98 PP HD-ZIP_I/II 90 elk 92 lk Cse_sc017628.1_g010.1 154 ILK 156 776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MEWSSSNPIP FIPRPAQNSF AFLYNCNTDP YLYPSGGAEM KHQMMQHASL PMMEINQLDY 60 ENNLDKKKRL SSEQLEALEN SFQEEIKLDP DRKMKLAHEL GLQPRQVAVW FQNRRARWKA 120 KQLERLYDTL KQEFDAVFRE KQKLQDEVLA LRTILKEHGS KRQAVSTPVY TDMSGEETVE 180 STPMAAIHSS NNPLATATTD MDADCNYMLN YDGATMHTSS YSNWTVLPSY P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 95 | KKKRLSSEQLEALENSFQEEIKLDPDRKMK |
2 | 114 | 122 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 4e-53 | HD-ZIP family protein |