PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017595.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 343aa MW: 38808.3 Da PI: 7.8165

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017595.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.4	5.1e-27	263	321	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K++k +++pr+YY+C++ gC+vkk ver+++d ++++ tY g Hnhe Cse_sc017595.1_g010.1 263 LDDGYKWRKYGKKKIKCTPNPRNYYKCSTIGCKVKKTVERDRNDSSYMIATYIGLHNHE 321 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MKAIDLVGST GTEWRGNNDD ANNEVSLLTL WSLRAKFTKL LENGRDSICE IKKLDDTLNG 60 LLEEQTKRKK ARVELNTNSS SCIPSVTQVN IPSDPLIPVT TKGRPKAATR VKPGMEEAID 120 SKKKRTYQIG NPNFSSSSLN YPSNTIDDRV YDHINVENTL YYKHNLNDDN SNPNTLSLID 180 HQDSSSSNYL SYLNTNEQTP DHLLEITTDL NISKSPQISA DAASMTQLTW IERQLLYDDN 240 PYRERMNDDT KIGFRIQTGL EVLDDGYKWR KYGKKKIKCT PNPRNYYKCS TIGCKVKKTV 300 ERDRNDSSYM IATYIGLHNH EVPSTTASGS NTCPTGVWTL QYS

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MKAIDLVGST GTEWRGNNDD ANNEVSLLTL WSLRAKFTKL LENGRDSICE IKKLDDTLNG  60
LLEEQTKRKK ARVELNTNSS SCIPSVTQVN IPSDPLIPVT TKGRPKAATR VKPGMEEAID  120
SKKKRTYQIG NPNFSSSSLN YPSNTIDDRV YDHINVENTL YYKHNLNDDN SNPNTLSLID  180
HQDSSSSNYL SYLNTNEQTP DHLLEITTDL NISKSPQISA DAASMTQLTW IERQLLYDDN  240
PYRERMNDDT KIGFRIQTGL EVLDDGYKWR KYGKKKIKCT PNPRNYYKCS TIGCKVKKTV  300
ERDRNDSSYM IATYIGLHNH EVPSTTASGS NTCPTGVWTL QYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	6e-18	WRKY family protein