PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc017388.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27767.6 Da PI: 8.6118 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.3e-19 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+Wv+eIr+p + r r++lg+f +a eAa a++aa+++l+g Cse_sc017388.1_g020.1 41 TYKGVRQRT-WGKWVSEIREP---N-RgSRVWLGTFNSAREAAIAYDAAARRLYG 90 69****999.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MLNVGNGSSG GGRKQDRRTA QASSRKGCMR GKGGPENASC TYKGVRQRTW GKWVSEIREP 60 NRGSRVWLGT FNSAREAAIA YDAAARRLYG PNAHVNLPDE TATPPPTPPA VTEAAKEARY 120 HRALEQMKKQ QEFERQIQIY MHQQHQQQQQ QQYQHKIKVE NTVREIPDLN GYTGANYHNI 180 YNNGTGESYL DPKSSTGNLN TNLPEFDDSG LWTEAASTMD YQSQAIDPGI GAFTFNDTIG 240 IELNHPLIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75490.1 | 1e-39 | ERF family protein |